Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MIR3169-201ENST00000578032 83 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 AC091057.3-201ENST00000602684 733 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 AC004805.2-201ENST00000605382 482 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 AC112220.2-201ENST00000605513 533 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.03□□□□□ -2.41
CLIP1P30622 Pinc.1-201ENST00000616452 154 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 AC009032.1-201ENST00000617574 431 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 RNU6-543P-201ENST00000362576 108 ntBASIC0.02□□□□□ -2.41
CLIP1P30622 RNU6-910P-201ENST00000390844 107 ntBASIC0.02□□□□□ -2.41
CLIP1P30622 RPL21P111-201ENST00000418453 477 ntBASIC0.02□□□□□ -2.41
CLIP1P30622 PPP1R11P2-201ENST00000423543 382 ntBASIC0.02□□□□□ -2.41
CLIP1P30622 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.02□□□□□ -2.41
CLIP1P30622 AC104692.1-201ENST00000472406 90 ntBASIC0.02□□□□□ -2.41
CLIP1P30622 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.02□□□□□ -2.41
CLIP1P30622 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.02□□□□□ -2.41
CLIP1P30622 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.02□□□□□ -2.41
CLIP1P30622 MTCO2P15-201ENST00000532655 656 ntBASIC0.02□□□□□ -2.41
CLIP1P30622 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.02□□□□□ -2.41
CLIP1P30622 MIR4493-201ENST00000584016 73 ntBASIC0.02□□□□□ -2.41
CLIP1P30622 AC068790.6-201ENST00000602558 258 ntBASIC0.02□□□□□ -2.41
CLIP1P30622 AC096720.1-201ENST00000604441 183 ntBASIC0.02□□□□□ -2.41
CLIP1P30622 AC069114.2-201ENST00000604699 304 ntBASIC0.02□□□□□ -2.41
CLIP1P30622 AC011939.3-201ENST00000613686 466 ntBASIC0.02□□□□□ -2.41
CLIP1P30622 AC092608.3-201ENST00000625017 386 ntBASIC0.02□□□□□ -2.41
CLIP1P30622 MTCO1P18-201ENST00000455518 1419 ntBASIC0.02□□□□□ -2.41
CLIP1P30622 Y_RNA.185-201ENST00000363894 100 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 RNU6-743P-201ENST00000364151 106 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 RNA5SP368-201ENST00000364298 116 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 RNU6-546P-201ENST00000383991 107 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 SNORA8.3-201ENST00000384679 139 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 MIR200A-201ENST00000384875 90 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 RPL31P54-201ENST00000429803 370 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.01□□□□□ -2.41
CLIP1P30622 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.01□□□□□ -2.41
CLIP1P30622 RNA5SP269-201ENST00000459032 137 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 RPL7P43-201ENST00000478876 753 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 RPL23AP54-201ENST00000495129 419 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 AC108740.1-201ENST00000498629 225 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 MIR5094-201ENST00000578766 85 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 AC011374.2-201ENST00000607135 526 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 AC009237.15-201ENST00000610252 501 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 AL590240.4-201ENST00000616908 390 ntBASIC0.01□□□□□ -2.41
CLIP1P30622 AC093422.3-201ENST00000428506 305 ntBASIC0□□□□□ -2.41
CLIP1P30622 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0□□□□□ -2.41
CLIP1P30622 AL035398.1-201ENST00000430869 322 ntBASIC0□□□□□ -2.41
CLIP1P30622 RPS15AP9-201ENST00000439856 381 ntBASIC0□□□□□ -2.41
CLIP1P30622 MTCO2P25-201ENST00000447065 681 ntBASIC0□□□□□ -2.41
CLIP1P30622 AC130509.1-201ENST00000464158 433 ntBASIC0□□□□□ -2.41
CLIP1P30622 COX7A2P2-201ENST00000505291 250 ntBASIC0□□□□□ -2.41
CLIP1P30622 TRAPPC2P7-201ENST00000509650 231 ntBASIC0□□□□□ -2.41
CLIP1P30622 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0□□□□□ -2.41
CLIP1P30622 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0□□□□□ -2.41
CLIP1P30622 IGLVI-20-201ENST00000519296 130 ntBASIC0□□□□□ -2.41
CLIP1P30622 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0□□□□□ -2.41
CLIP1P30622 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0□□□□□ -2.41
CLIP1P30622 uc_338.15-201ENST00000615470 191 ntBASIC0□□□□□ -2.41
CLIP1P30622 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0□□□□□ -2.41
CLIP1P30622 RNU6-386P-201ENST00000362650 107 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 RNU6-923P-201ENST00000364753 107 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 RPL22P22-201ENST00000395439 379 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC-0.01□□□□□ -2.41
CLIP1P30622 AL121978.1-201ENST00000402778 359 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 AC008267.5-201ENST00000424928 265 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 AC092001.1-201ENST00000453012 261 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
CLIP1P30622 RPS26P45-201ENST00000471748 340 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 RNU6-965P-201ENST00000516721 96 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.01□□□□□ -2.41
CLIP1P30622 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.01□□□□□ -2.41
CLIP1P30622 AC093249.1-201ENST00000567049 203 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 AP001180.6-201ENST00000584918 159 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.01□□□□□ -2.41
CLIP1P30622 SUMO2P14-201ENST00000604488 293 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 RAC1P9-201ENST00000604990 392 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 AL355802.4-201ENST00000607635 548 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 AC092106.3-201ENST00000611308 722 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 AC240442.1-201ENST00000616055 283 ntBASIC-0.01□□□□□ -2.41
CLIP1P30622 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC-0.01□□□□□ -2.41
CLIP1P30622 MIRLET7D-201ENST00000362263 87 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 RNU4-79P-201ENST00000362764 141 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 SNORD114-6-201ENST00000364393 72 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
CLIP1P30622 SNORA51.6-201ENST00000384151 125 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 RPL26P27-201ENST00000414397 437 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.02□□□□□ -2.41
CLIP1P30622 AL590556.1-201ENST00000423231 483 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 PSMA6P3-201ENST00000428242 164 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
CLIP1P30622 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.02□□□□□ -2.41
CLIP1P30622 AC002381.1-201ENST00000447049 280 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 AL441985.1-201ENST00000457727 251 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 AC093259.1-201ENST00000509755 300 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.02□□□□□ -2.41
CLIP1P30622 RNA5SP437-201ENST00000517249 129 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-0.02□□□□□ -2.41
CLIP1P30622 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms