Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC006512.1-201ENST00000468816 291 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 AC068781.1-201ENST00000488231 618 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 AC092436.1-201ENST00000506450 503 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 SMURF2P1-201ENST00000514992 481 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 RNU7-193P-201ENST00000516723 65 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.2□□□□□ -2.06
PTPN4P29074 MIR4703-201ENST00000577728 79 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 AL158827.2-201ENST00000602494 330 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 AC007684.1-201ENST00000609671 477 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 MIR6840-201ENST00000611937 71 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 RMST_4.1-201ENST00000616886 107 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 AC008121.3-201ENST00000618726 433 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 MIR6873-201ENST00000622788 63 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 AC005609.4-201ENST00000625071 447 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.2□□□□□ -2.06
PTPN4P29074 AL691447.3-201ENST00000635020 330 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.2□□□□□ -2.06
PTPN4P29074 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.2□□□□□ -2.06
PTPN4P29074 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
PTPN4P29074 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PTPN4P29074 CIR1P3-201ENST00000405137 479 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 RNA5SP338-201ENST00000410495 85 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 RNU4-55P-201ENST00000410731 137 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 RNU4-46P-201ENST00000410818 138 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 AC016831.2-201ENST00000417179 352 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 AL353193.1-201ENST00000421444 268 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.19□□□□□ -2.06
PTPN4P29074 AC009238.1-201ENST00000442165 424 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.19□□□□□ -2.06
PTPN4P29074 AC096638.1-201ENST00000444678 216 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 AC009237.6-201ENST00000446969 424 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.19□□□□□ -2.06
PTPN4P29074 MTND1P18-201ENST00000448191 573 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 AL118520.1-201ENST00000450770 291 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.19□□□□□ -2.06
PTPN4P29074 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.19□□□□□ -2.06
PTPN4P29074 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.19□□□□□ -2.06
PTPN4P29074 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.19□□□□□ -2.06
PTPN4P29074 RNU1-40P-201ENST00000516816 164 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 RNU1-97P-201ENST00000516872 164 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.19□□□□□ -2.06
PTPN4P29074 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
PTPN4P29074 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.19□□□□□ -2.06
PTPN4P29074 AC026464.5-201ENST00000562497 722 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 MIR5007-201ENST00000583098 95 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 MIR5002-201ENST00000584713 97 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 AC008945.2-201ENST00000606056 604 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 AC064807.4-201ENST00000607201 407 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 AC008536.2-201ENST00000607284 349 ntBASIC2.19□□□□□ -2.06
PTPN4P29074 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PTPN4P29074 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
PTPN4P29074 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.19□□□□□ -2.06
PTPN4P29074 MTND5P6-201ENST00000422338 1798 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 RNU6-623P-201ENST00000363143 105 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 RNU1-148P-201ENST00000384472 162 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.18□□□□□ -2.06
PTPN4P29074 RNA5SP390-201ENST00000410191 113 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.18□□□□□ -2.06
PTPN4P29074 RPL21P90-201ENST00000415692 466 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 AC138623.1-201ENST00000418060 216 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.18□□□□□ -2.06
PTPN4P29074 AL589823.1-201ENST00000429577 183 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 RPL23AP7-203ENST00000449021 469 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 AC112771.1-201ENST00000463581 102 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 AC025033.1-201ENST00000463883 194 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 RPL7P43-201ENST00000478876 753 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.18□□□□□ -2.06
PTPN4P29074 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.18□□□□□ -2.06
PTPN4P29074 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.18□□□□□ -2.06
PTPN4P29074 LRRC34P2-201ENST00000514850 553 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 AP005435.4-201ENST00000529514 284 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 CBX3P7-201ENST00000532876 502 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 SNRPGP18-201ENST00000553000 214 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.18□□□□□ -2.06
PTPN4P29074 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.18□□□□□ -2.06
PTPN4P29074 AC136619.2-201ENST00000563361 631 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 MIR3941-201ENST00000582572 103 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 AC008752.3-201ENST00000588113 712 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 AC007229.1-201ENST00000590455 412 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 BNIP3P30-201ENST00000601184 574 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 AC021646.1-201ENST00000605469 484 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
PTPN4P29074 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.18□□□□□ -2.06
PTPN4P29074 OR5AK4P-201ENST00000635912 903 ntBASIC2.18□□□□□ -2.06
PTPN4P29074 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PTPN4P29074 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
PTPN4P29074 RNU6-384P-201ENST00000364900 104 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.17□□□□□ -2.06
PTPN4P29074 SRIP2-201ENST00000428470 166 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 AL161788.1-201ENST00000441805 169 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.17□□□□□ -2.06
PTPN4P29074 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.17□□□□□ -2.06
PTPN4P29074 AL021397.1-201ENST00000451806 248 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.17□□□□□ -2.06
PTPN4P29074 AC011005.2-201ENST00000487324 359 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 MTCO3P9-201ENST00000506989 781 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 AC105417.1-201ENST00000514691 285 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms