Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
BDNFP23560 RNU6-1106P-201ENST00000390845 107 ntBASIC2.56□□□□□ -2
BDNFP23560 AL033519.2-201ENST00000403958 392 ntBASIC2.56□□□□□ -2
BDNFP23560 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.56□□□□□ -2
BDNFP23560 AL356379.1-201ENST00000414105 126 ntBASIC2.56□□□□□ -2
BDNFP23560 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.56□□□□□ -2
BDNFP23560 MTCO2P11-201ENST00000431069 680 ntBASIC2.56□□□□□ -2
BDNFP23560 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.56□□□□□ -2
BDNFP23560 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.56□□□□□ -2
BDNFP23560 AC132942.1-201ENST00000486753 483 ntBASIC2.56□□□□□ -2
BDNFP23560 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.56□□□□□ -2
BDNFP23560 AC234781.5-201ENST00000508429 271 ntBASIC2.56□□□□□ -2
BDNFP23560 AC021269.2-201ENST00000532318 330 ntBASIC2.56□□□□□ -2
BDNFP23560 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.56□□□□□ -2
BDNFP23560 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.56□□□□□ -2
BDNFP23560 AC027807.1-201ENST00000559921 996 ntBASIC2.56□□□□□ -2
BDNFP23560 AC073648.5-201ENST00000603502 305 ntBASIC2.56□□□□□ -2
BDNFP23560 AC046143.2-201ENST00000609789 160 ntBASIC2.56□□□□□ -2
BDNFP23560 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.56□□□□□ -2
BDNFP23560 AC022202.1-201ENST00000613515 211 ntBASIC2.56□□□□□ -2
BDNFP23560 AL162373.1-201ENST00000620433 407 ntBASIC2.56□□□□□ -2
BDNFP23560 YWHAEP7-203ENST00000622054 312 ntBASIC2.56□□□□□ -2
BDNFP23560 AC005858.4-201ENST00000623191 700 ntBASIC2.56□□□□□ -2
BDNFP23560 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.56□□□□□ -2
BDNFP23560 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
BDNFP23560 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
BDNFP23560 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
BDNFP23560 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.55□□□□□ -2
BDNFP23560 SNORD114-30-201ENST00000364448 72 ntBASIC2.55□□□□□ -2
BDNFP23560 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
BDNFP23560 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
BDNFP23560 SNORD14D-201ENST00000384390 87 ntBASIC2.55□□□□□ -2
BDNFP23560 RNU2-9P-201ENST00000410194 145 ntBASIC2.55□□□□□ -2
BDNFP23560 AL158823.1-201ENST00000418441 478 ntBASIC2.55□□□□□ -2
BDNFP23560 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.55□□□□□ -2
BDNFP23560 AC090960.1-201ENST00000421072 306 ntBASIC2.55□□□□□ -2
BDNFP23560 ZNF680P1-201ENST00000436625 1469 ntBASIC2.55□□□□□ -2
BDNFP23560 MTND2P29-201ENST00000438595 412 ntBASIC2.55□□□□□ -2
BDNFP23560 AL353689.1-201ENST00000438895 199 ntBASIC2.55□□□□□ -2
BDNFP23560 AL353752.1-201ENST00000454946 260 ntBASIC2.55□□□□□ -2
BDNFP23560 AL122001.1-201ENST00000457027 370 ntBASIC2.55□□□□□ -2
BDNFP23560 PRELID3BP1-201ENST00000457142 540 ntBASIC2.55□□□□□ -2
BDNFP23560 SCARNA18-201ENST00000459004 134 ntBASIC2.55□□□□□ -2
BDNFP23560 RPL21P99-201ENST00000480369 423 ntBASIC2.55□□□□□ -2
BDNFP23560 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.55□□□□□ -2
BDNFP23560 AC026436.1-201ENST00000510537 270 ntBASIC2.55□□□□□ -2
BDNFP23560 RN7SKP298-201ENST00000515950 94 ntBASIC2.55□□□□□ -2
BDNFP23560 RNU2-69P-201ENST00000516061 100 ntBASIC2.55□□□□□ -2
BDNFP23560 COPS8P3-201ENST00000526024 482 ntBASIC2.55□□□□□ -2
BDNFP23560 CYCSP27-201ENST00000527643 293 ntBASIC2.55□□□□□ -2
BDNFP23560 AL137161.1-201ENST00000532231 390 ntBASIC2.55□□□□□ -2
BDNFP23560 AC091544.4-201ENST00000555268 342 ntBASIC2.55□□□□□ -2
BDNFP23560 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.55□□□□□ -2
BDNFP23560 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.55□□□□□ -2
BDNFP23560 AP000654.2-201ENST00000605633 586 ntBASIC2.55□□□□□ -2
BDNFP23560 AC004908.3-201ENST00000610248 625 ntBASIC2.55□□□□□ -2
BDNFP23560 AL627230.6-201ENST00000611129 280 ntBASIC2.55□□□□□ -2
BDNFP23560 U2.17-201ENST00000611454 95 ntBASIC2.55□□□□□ -2
BDNFP23560 MIR3974-201ENST00000637126 96 ntBASIC2.55□□□□□ -2
BDNFP23560 ZNF702P-202ENST00000434269 1966 ntBASIC2.54□□□□□ -2
BDNFP23560 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.54□□□□□ -2
BDNFP23560 RNU6-1141P-201ENST00000364520 107 ntBASIC2.54□□□□□ -2
BDNFP23560 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.54□□□□□ -2
BDNFP23560 Y_RNA.399-201ENST00000383955 105 ntBASIC2.54□□□□□ -2
BDNFP23560 RNU6-1127P-201ENST00000384580 107 ntBASIC2.54□□□□□ -2
BDNFP23560 RNY3P9-201ENST00000384727 106 ntBASIC2.54□□□□□ -2
BDNFP23560 BTF3L4P2-201ENST00000392798 346 ntBASIC2.54□□□□□ -2
BDNFP23560 Y_RNA.597-201ENST00000410463 100 ntBASIC2.54□□□□□ -2
BDNFP23560 RNU6-293P-201ENST00000411259 106 ntBASIC2.54□□□□□ -2
BDNFP23560 SNORD56-201ENST00000413522 71 ntBASIC2.54□□□□□ -2
BDNFP23560 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.54□□□□□ -2
BDNFP23560 AC073464.1-201ENST00000429823 534 ntBASIC2.54□□□□□ -2
BDNFP23560 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.54□□□□□ -2
BDNFP23560 RPL23AP6-201ENST00000446637 472 ntBASIC2.54□□□□□ -2
BDNFP23560 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.54□□□□□ -2
BDNFP23560 PMCHL2-203ENST00000457791 237 ntBASIC2.54□□□□□ -2
BDNFP23560 RNU7-63P-201ENST00000459054 62 ntBASIC2.54□□□□□ -2
BDNFP23560 PTP4A1P4-201ENST00000512479 322 ntBASIC2.54□□□□□ -2
BDNFP23560 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.54□□□□□ -2
BDNFP23560 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.54□□□□□ -2
BDNFP23560 SNORD53-201ENST00000579969 78 ntBASIC2.54□□□□□ -2
BDNFP23560 AC243960.4-201ENST00000600532 288 ntBASIC2.54□□□□□ -2
BDNFP23560 AL109918.3-201ENST00000603072 338 ntBASIC2.54□□□□□ -2
BDNFP23560 AC018889.1-201ENST00000605372 397 ntBASIC2.54□□□□□ -2
BDNFP23560 AP001596.2-201ENST00000608410 312 ntBASIC2.54□□□□□ -2
BDNFP23560 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.54□□□□□ -2
BDNFP23560 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.54□□□□□ -2
BDNFP23560 AC005296.1-201ENST00000616145 209 ntBASIC2.54□□□□□ -2
BDNFP23560 AL132822.1-201ENST00000617063 513 ntBASIC2.54□□□□□ -2
BDNFP23560 AL590808.1-201ENST00000618696 141 ntBASIC2.54□□□□□ -2
BDNFP23560 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.54□□□□□ -2
BDNFP23560 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
BDNFP23560 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
BDNFP23560 RNU1-51P-201ENST00000365345 176 ntBASIC2.53□□□□□ -2
BDNFP23560 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.53□□□□□ -2
BDNFP23560 MIR1294-201ENST00000408503 142 ntBASIC2.53□□□□□ -2
BDNFP23560 RNA5SP450-201ENST00000411206 102 ntBASIC2.53□□□□□ -2
BDNFP23560 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.53□□□□□ -2
BDNFP23560 AL358934.1-201ENST00000432346 324 ntBASIC2.53□□□□□ -2
BDNFP23560 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms