Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.54□□□□□ -2.16
COL5A1P20908 PSPHP1-201ENST00000450062 261 ntBASIC1.54□□□□□ -2.16
COL5A1P20908 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.54□□□□□ -2.16
COL5A1P20908 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.54□□□□□ -2.16
COL5A1P20908 RPL39P36-201ENST00000490784 156 ntBASIC1.54□□□□□ -2.16
COL5A1P20908 SNORD60.2-201ENST00000516883 86 ntBASIC1.54□□□□□ -2.16
COL5A1P20908 ERHP1-201ENST00000523006 310 ntBASIC1.54□□□□□ -2.16
COL5A1P20908 AP004371.1-201ENST00000525240 214 ntBASIC1.54□□□□□ -2.16
COL5A1P20908 AC011979.2-201ENST00000527568 352 ntBASIC1.54□□□□□ -2.16
COL5A1P20908 AC016957.1-201ENST00000534895 309 ntBASIC1.54□□□□□ -2.16
COL5A1P20908 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.54□□□□□ -2.16
COL5A1P20908 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.54□□□□□ -2.16
COL5A1P20908 AL133241.1-201ENST00000556832 487 ntBASIC1.54□□□□□ -2.16
COL5A1P20908 AC015720.1-201ENST00000565251 277 ntBASIC1.54□□□□□ -2.16
COL5A1P20908 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.54□□□□□ -2.16
COL5A1P20908 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.54□□□□□ -2.16
COL5A1P20908 AP000907.4-201ENST00000604143 237 ntBASIC1.54□□□□□ -2.16
COL5A1P20908 AL357078.3-201ENST00000607528 618 ntBASIC1.54□□□□□ -2.16
COL5A1P20908 AC068944.2-201ENST00000610373 403 ntBASIC1.54□□□□□ -2.16
COL5A1P20908 AC093648.1-201ENST00000623546 606 ntBASIC1.54□□□□□ -2.16
COL5A1P20908 CR848007.1-201ENST00000442354 1699 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
COL5A1P20908 U8.1-201ENST00000362843 134 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 RNU6-511P-201ENST00000363496 107 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 Y_RNA.248-201ENST00000364501 109 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 SNORD48-201ENST00000364953 64 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
COL5A1P20908 MT-TC-201ENST00000387405 66 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 MTCO3P40-201ENST00000392516 676 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 MIR1277-201ENST00000408536 78 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 RNU6-516P-201ENST00000411381 104 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 UBE2FP1-201ENST00000416536 447 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 AC092047.1-201ENST00000424997 240 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.53□□□□□ -2.16
COL5A1P20908 AL358934.1-201ENST00000432346 324 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 MTND1P4-201ENST00000435196 415 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 AL121871.1-201ENST00000443413 436 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.53□□□□□ -2.16
COL5A1P20908 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.53□□□□□ -2.16
COL5A1P20908 AC009474.2-201ENST00000451383 136 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 MTND3P16-201ENST00000452205 344 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.53□□□□□ -2.16
COL5A1P20908 AL049714.1-201ENST00000466686 347 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.53□□□□□ -2.16
COL5A1P20908 AP001804.3-201ENST00000525146 880 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 DEFB108D-201ENST00000527787 222 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.53□□□□□ -2.16
COL5A1P20908 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.53□□□□□ -2.16
COL5A1P20908 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.53□□□□□ -2.16
COL5A1P20908 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.53□□□□□ -2.16
COL5A1P20908 SNORA59B-202ENST00000578183 701 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 AL355810.1-201ENST00000614629 552 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 AC010133.1-201ENST00000615809 842 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 AC040168.1-201ENST00000623594 991 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.53□□□□□ -2.16
COL5A1P20908 MIR3199-2-201ENST00000636243 86 ntBASIC1.53□□□□□ -2.16
COL5A1P20908 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
COL5A1P20908 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
COL5A1P20908 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
COL5A1P20908 AL137003.2-201ENST00000606924 2538 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 RNU6-1120P-201ENST00000362988 108 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 RNU6-1090P-201ENST00000364065 94 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 RNU6-534P-201ENST00000364877 106 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 MIR517C-201ENST00000385103 95 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.52□□□□□ -2.17
COL5A1P20908 AL591704.1-201ENST00000432574 275 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 MTCO2P3-201ENST00000442543 421 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.52□□□□□ -2.17
COL5A1P20908 RPS23P3-201ENST00000470993 430 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 RPS29P25-201ENST00000481709 171 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.52□□□□□ -2.17
COL5A1P20908 RPS15AP36-201ENST00000492022 382 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AC023194.1-201ENST00000493084 308 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AC117522.1-201ENST00000509821 380 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.52□□□□□ -2.17
COL5A1P20908 SNORA31.8-201ENST00000516327 108 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AP005660.1-201ENST00000522972 293 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AC109635.3-201ENST00000529536 185 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.52□□□□□ -2.17
COL5A1P20908 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.52□□□□□ -2.17
COL5A1P20908 AL512360.1-201ENST00000555346 234 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 SUB1P2-201ENST00000556401 297 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AL359212.1-201ENST00000556608 614 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AC024619.4-201ENST00000580924 316 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.52□□□□□ -2.17
COL5A1P20908 BNIP3P30-201ENST00000601184 574 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AC136443.5-201ENST00000603741 370 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AP002360.4-201ENST00000606980 481 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.52□□□□□ -2.17
COL5A1P20908 OR5H6-203ENST00000642105 978 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.52□□□□□ -2.17
COL5A1P20908 AL596028.1-201ENST00000326971 197 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 Y_RNA.36-201ENST00000362602 112 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 RNU6-877P-201ENST00000383868 107 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 RNU6-946P-201ENST00000383878 107 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 RNU6-483P-201ENST00000384088 108 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms