Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 RNU6-1140P-201ENST00000410517 106 ntBASIC2.92□□□□□ -1.94
CD53P19397 RNU2-23P-201ENST00000410545 195 ntBASIC2.92□□□□□ -1.94
CD53P19397 CYCSP33-201ENST00000414485 327 ntBASIC2.92□□□□□ -1.94
CD53P19397 COTL1P1-201ENST00000422309 375 ntBASIC2.92□□□□□ -1.94
CD53P19397 SRIP2-201ENST00000428470 166 ntBASIC2.92□□□□□ -1.94
CD53P19397 AL669831.1-202ENST00000428504 417 ntBASIC2.92□□□□□ -1.94
CD53P19397 AL591043.1-201ENST00000432461 424 ntBASIC2.92□□□□□ -1.94
CD53P19397 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.92□□□□□ -1.94
CD53P19397 AC244505.4-201ENST00000434905 287 ntBASIC2.92□□□□□ -1.94
CD53P19397 GTF2IP13-201ENST00000438487 386 ntBASIC2.92□□□□□ -1.94
CD53P19397 SSXP5-201ENST00000443473 287 ntBASIC2.92□□□□□ -1.94
CD53P19397 MTND1P11-201ENST00000456661 876 ntBASIC2.92□□□□□ -1.94
CD53P19397 AC007547.1-201ENST00000462177 490 ntBASIC2.92□□□□□ -1.94
CD53P19397 HMGN2P26-201ENST00000463169 339 ntBASIC2.92□□□□□ -1.94
CD53P19397 AP001025.1-201ENST00000486139 332 ntBASIC2.92□□□□□ -1.94
CD53P19397 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.92□□□□□ -1.94
CD53P19397 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.92□□□□□ -1.94
CD53P19397 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.92□□□□□ -1.94
CD53P19397 SNORA48.11-201ENST00000517015 89 ntBASIC2.92□□□□□ -1.94
CD53P19397 CKS1BP7-201ENST00000522230 235 ntBASIC2.92□□□□□ -1.94
CD53P19397 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.92□□□□□ -1.94
CD53P19397 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.92□□□□□ -1.94
CD53P19397 AL670379.2-201ENST00000604983 252 ntBASIC2.92□□□□□ -1.94
CD53P19397 AC009248.2-201ENST00000619826 254 ntBASIC2.92□□□□□ -1.94
CD53P19397 AC022418.1-201ENST00000624118 445 ntBASIC2.92□□□□□ -1.94
CD53P19397 AC006386.2-201ENST00000624491 75 ntBASIC2.92□□□□□ -1.94
CD53P19397 AC012005.1-201ENST00000624575 75 ntBASIC2.92□□□□□ -1.94
CD53P19397 Z69720.2-201ENST00000624755 279 ntBASIC2.92□□□□□ -1.94
CD53P19397 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.92□□□□□ -1.94
CD53P19397 AC093831.2-201ENST00000624393 3427 ntBASIC2.92□□□□□ -1.94
CD53P19397 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.92□□□□□ -1.94
CD53P19397 AC002543.1-201ENST00000299783 1954 ntBASIC2.92□□□□□ -1.94
CD53P19397 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CD53P19397 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CD53P19397 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.91□□□□□ -1.94
CD53P19397 RNU6-655P-201ENST00000362858 107 ntBASIC2.91□□□□□ -1.94
CD53P19397 Y_RNA.142-201ENST00000363491 102 ntBASIC2.91□□□□□ -1.94
CD53P19397 RNU1-138P-201ENST00000384093 164 ntBASIC2.91□□□□□ -1.94
CD53P19397 MIR514A2-201ENST00000385131 88 ntBASIC2.91□□□□□ -1.94
CD53P19397 MIR514A3-201ENST00000385132 88 ntBASIC2.91□□□□□ -1.94
CD53P19397 MIR561-201ENST00000385216 97 ntBASIC2.91□□□□□ -1.94
CD53P19397 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.91□□□□□ -1.94
CD53P19397 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.91□□□□□ -1.94
CD53P19397 AC008267.5-201ENST00000424928 265 ntBASIC2.91□□□□□ -1.94
CD53P19397 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.91□□□□□ -1.94
CD53P19397 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.91□□□□□ -1.94
CD53P19397 AC011753.1-201ENST00000451001 220 ntBASIC2.91□□□□□ -1.94
CD53P19397 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.91□□□□□ -1.94
CD53P19397 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.91□□□□□ -1.94
CD53P19397 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.91□□□□□ -1.94
CD53P19397 RN7SL75P-201ENST00000461926 281 ntBASIC2.91□□□□□ -1.94
CD53P19397 MTCO3P9-201ENST00000506989 781 ntBASIC2.91□□□□□ -1.94
CD53P19397 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.91□□□□□ -1.94
CD53P19397 RNA5SP341-201ENST00000516261 117 ntBASIC2.91□□□□□ -1.94
CD53P19397 RNA5SP367-201ENST00000516557 118 ntBASIC2.91□□□□□ -1.94
CD53P19397 RNU6-1314P-201ENST00000517139 104 ntBASIC2.91□□□□□ -1.94
CD53P19397 AL137161.1-201ENST00000532231 390 ntBASIC2.91□□□□□ -1.94
CD53P19397 RAB11AP2-201ENST00000545905 639 ntBASIC2.91□□□□□ -1.94
CD53P19397 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.91□□□□□ -1.94
CD53P19397 MIR3941-201ENST00000582572 103 ntBASIC2.91□□□□□ -1.94
CD53P19397 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.91□□□□□ -1.94
CD53P19397 AC022140.2-201ENST00000623500 188 ntBASIC2.91□□□□□ -1.94
CD53P19397 AC131280.1-202ENST00000624067 4211 ntBASIC2.91□□□□□ -1.94
CD53P19397 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
CD53P19397 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CD53P19397 RNU6-212P-201ENST00000362642 104 ntBASIC2.9□□□□□ -1.95
CD53P19397 RNU6-527P-201ENST00000363425 104 ntBASIC2.9□□□□□ -1.95
CD53P19397 Y_RNA.378-201ENST00000365652 113 ntBASIC2.9□□□□□ -1.95
CD53P19397 RNA5SP229-201ENST00000410809 99 ntBASIC2.9□□□□□ -1.95
CD53P19397 RNU2-41P-201ENST00000410991 178 ntBASIC2.9□□□□□ -1.95
CD53P19397 RN7SKP58-201ENST00000411010 305 ntBASIC2.9□□□□□ -1.95
CD53P19397 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.9□□□□□ -1.95
CD53P19397 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.9□□□□□ -1.95
CD53P19397 PRPS1P1-201ENST00000445305 876 ntBASIC2.9□□□□□ -1.95
CD53P19397 RPS3P1-201ENST00000456781 192 ntBASIC2.9□□□□□ -1.95
CD53P19397 SCARNA18-201ENST00000459004 134 ntBASIC2.9□□□□□ -1.95
CD53P19397 RPL23AP11-201ENST00000475260 469 ntBASIC2.9□□□□□ -1.95
CD53P19397 AC083904.1-201ENST00000487828 231 ntBASIC2.9□□□□□ -1.95
CD53P19397 AC068781.1-201ENST00000488231 618 ntBASIC2.9□□□□□ -1.95
CD53P19397 MTCYBP40-201ENST00000509390 1135 ntBASIC2.9□□□□□ -1.95
CD53P19397 MTND3P22-201ENST00000510932 243 ntBASIC2.9□□□□□ -1.95
CD53P19397 Y_RNA.665-201ENST00000516177 98 ntBASIC2.9□□□□□ -1.95
CD53P19397 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.9□□□□□ -1.95
CD53P19397 AP000763.2-201ENST00000540641 163 ntBASIC2.9□□□□□ -1.95
CD53P19397 AL118558.2-201ENST00000556294 238 ntBASIC2.9□□□□□ -1.95
CD53P19397 AC005668.1-201ENST00000571142 476 ntBASIC2.9□□□□□ -1.95
CD53P19397 MIR4424-201ENST00000585257 86 ntBASIC2.9□□□□□ -1.95
CD53P19397 AC243960.4-201ENST00000600532 288 ntBASIC2.9□□□□□ -1.95
CD53P19397 AC091903.1-201ENST00000624322 454 ntBASIC2.9□□□□□ -1.95
CD53P19397 MIR203B-201ENST00000636080 86 ntBASIC2.9□□□□□ -1.95
CD53P19397 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD53P19397 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD53P19397 Y_RNA.263-201ENST00000364659 114 ntBASIC2.89□□□□□ -1.95
CD53P19397 SNORD81.2-201ENST00000365153 76 ntBASIC2.89□□□□□ -1.95
CD53P19397 MT-TD-201ENST00000387419 68 ntBASIC2.89□□□□□ -1.95
CD53P19397 SNORD70.1-201ENST00000391007 85 ntBASIC2.89□□□□□ -1.95
CD53P19397 RNU6-510P-201ENST00000391239 108 ntBASIC2.89□□□□□ -1.95
CD53P19397 RNU4-47P-201ENST00000410876 114 ntBASIC2.89□□□□□ -1.95
CD53P19397 RNU6-1148P-201ENST00000410992 104 ntBASIC2.89□□□□□ -1.95
CD53P19397 RNU6-1245P-201ENST00000411130 106 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms