Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 SNORD116-18-201ENST00000383961 92 ntBASIC4.38□□□□□ -1.71
HOXD8P13378 RNU6-417P-201ENST00000384712 107 ntBASIC4.38□□□□□ -1.71
HOXD8P13378 MIR199A2-201ENST00000385289 110 ntBASIC4.38□□□□□ -1.71
HOXD8P13378 RNA5SP213-201ENST00000391031 106 ntBASIC4.38□□□□□ -1.71
HOXD8P13378 RNU6-159P-201ENST00000391080 106 ntBASIC4.38□□□□□ -1.71
HOXD8P13378 AL512844.2-201ENST00000433990 593 ntBASIC4.38□□□□□ -1.71
HOXD8P13378 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.38□□□□□ -1.71
HOXD8P13378 RNU6-58P-201ENST00000517143 103 ntBASIC4.38□□□□□ -1.71
HOXD8P13378 IGLV3-26-201ENST00000520756 302 ntBASIC4.38□□□□□ -1.71
HOXD8P13378 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXD8P13378 KLKP1-201ENST00000595979 403 ntBASIC4.38□□□□□ -1.71
HOXD8P13378 AC091895.1-201ENST00000624494 256 ntBASIC4.38□□□□□ -1.71
HOXD8P13378 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXD8P13378 MTND1P7-201ENST00000632801 297 ntBASIC4.38□□□□□ -1.71
HOXD8P13378 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD8P13378 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD8P13378 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD8P13378 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXD8P13378 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HOXD8P13378 AC007496.3-201ENST00000624987 3443 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD8P13378 FTLP6-201ENST00000355274 422 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 Y_RNA.136-201ENST00000363444 102 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 Y_RNA.272-201ENST00000364696 102 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 RNU4-56P-201ENST00000364700 142 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 MIR544A-201ENST00000384855 91 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 MIR487A-201ENST00000385009 80 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 MIR329-1-201ENST00000385028 80 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 SNORA3C-201ENST00000408792 125 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 Y_RNA.595-201ENST00000410403 105 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 RNU6-394P-201ENST00000410735 107 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 AC009237.7-201ENST00000447357 229 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 AC005042.3-201ENST00000453230 174 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 AL133162.1-201ENST00000463228 453 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 RPL23AP14-201ENST00000468281 468 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 RN7SL585P-201ENST00000470538 280 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 S100A11P1-201ENST00000477525 312 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD8P13378 RNU1-95P-201ENST00000516357 160 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 RNU1-128P-201ENST00000516704 160 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 AC016256.1-201ENST00000547971 354 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD8P13378 MIR7154-201ENST00000620673 73 ntBASIC4.37□□□□□ -1.71
HOXD8P13378 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD8P13378 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD8P13378 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HOXD8P13378 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD8P13378 RNU1-108P-201ENST00000362556 161 ntBASIC4.36□□□□□ -1.71
HOXD8P13378 RNU5B-2P-201ENST00000363036 113 ntBASIC4.36□□□□□ -1.71
HOXD8P13378 Y_RNA.343-201ENST00000365354 112 ntBASIC4.36□□□□□ -1.71
HOXD8P13378 RNU6-1027P-201ENST00000383998 107 ntBASIC4.36□□□□□ -1.71
HOXD8P13378 U8.10-201ENST00000384260 133 ntBASIC4.36□□□□□ -1.71
HOXD8P13378 AC138623.1-201ENST00000418060 216 ntBASIC4.36□□□□□ -1.71
HOXD8P13378 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXD8P13378 RPL21P66-201ENST00000426566 466 ntBASIC4.36□□□□□ -1.71
HOXD8P13378 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXD8P13378 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXD8P13378 PPIAP15-201ENST00000479662 484 ntBASIC4.36□□□□□ -1.71
HOXD8P13378 AC016632.1-201ENST00000503994 196 ntBASIC4.36□□□□□ -1.71
HOXD8P13378 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXD8P13378 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXD8P13378 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXD8P13378 MIR4308-201ENST00000580634 81 ntBASIC4.36□□□□□ -1.71
HOXD8P13378 MIR3200-201ENST00000580767 85 ntBASIC4.36□□□□□ -1.71
HOXD8P13378 AL356157.2-201ENST00000605122 111 ntBASIC4.36□□□□□ -1.71
HOXD8P13378 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HOXD8P13378 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HOXD8P13378 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HOXD8P13378 AC118273.1-201ENST00000525324 3006 ntBASIC4.36□□□□□ -1.71
HOXD8P13378 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD8P13378 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD8P13378 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HOXD8P13378 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXD8P13378 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD8P13378 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HOXD8P13378 RNU6-137P-201ENST00000363680 108 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 SNORD32A-201ENST00000364805 84 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 RNA5SP97-201ENST00000365006 84 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD8P13378 Z98749.2-208ENST00000381646 500 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 SNORA5A-201ENST00000384111 134 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 MIR493-201ENST00000385254 89 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 SNORA40.19-201ENST00000390846 128 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 MIR1251-201ENST00000408552 70 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 RNU2-51P-201ENST00000410708 197 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 AL591419.1-201ENST00000427423 339 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD8P13378 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXD8P13378 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXD8P13378 SNORD2.1-201ENST00000458762 69 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 snoU13.6-201ENST00000458785 104 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 SNORA59A-201ENST00000459326 152 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 RNU6-703P-201ENST00000516946 107 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.35□□□□□ -1.71
HOXD8P13378 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD8P13378 AC007179.3-201ENST00000604976 235 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 AC108706.1-201ENST00000611053 297 ntBASIC4.35□□□□□ -1.71
HOXD8P13378 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HOXD8P13378 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HOXD8P13378 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms