Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MMP3P08254 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
MMP3P08254 RPL9P7-201ENST00000330965 580 ntBASIC2.95□□□□□ -1.94
MMP3P08254 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MMP3P08254 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MMP3P08254 SNORD116-11-201ENST00000383882 92 ntBASIC2.95□□□□□ -1.94
MMP3P08254 MIR888-201ENST00000401186 77 ntBASIC2.95□□□□□ -1.94
MMP3P08254 MIR887-201ENST00000401258 79 ntBASIC2.95□□□□□ -1.94
MMP3P08254 MIR548K-201ENST00000408406 116 ntBASIC2.95□□□□□ -1.94
MMP3P08254 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.95□□□□□ -1.94
MMP3P08254 RPL26P27-201ENST00000414397 437 ntBASIC2.95□□□□□ -1.94
MMP3P08254 RPL7P10-201ENST00000417407 739 ntBASIC2.95□□□□□ -1.94
MMP3P08254 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.95□□□□□ -1.94
MMP3P08254 RPS29P6-201ENST00000438196 145 ntBASIC2.95□□□□□ -1.94
MMP3P08254 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.95□□□□□ -1.94
MMP3P08254 AL359672.1-201ENST00000442302 409 ntBASIC2.95□□□□□ -1.94
MMP3P08254 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.95□□□□□ -1.94
MMP3P08254 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.95□□□□□ -1.94
MMP3P08254 AL031274.1-201ENST00000450334 232 ntBASIC2.95□□□□□ -1.94
MMP3P08254 MTND5P5-201ENST00000503764 376 ntBASIC2.95□□□□□ -1.94
MMP3P08254 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
MMP3P08254 FGF7P4-201ENST00000509595 295 ntBASIC2.95□□□□□ -1.94
MMP3P08254 RN7SKP24-201ENST00000515888 284 ntBASIC2.95□□□□□ -1.94
MMP3P08254 SNORA31.26-201ENST00000517250 137 ntBASIC2.95□□□□□ -1.94
MMP3P08254 AC069113.1-201ENST00000517763 267 ntBASIC2.95□□□□□ -1.94
MMP3P08254 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.95□□□□□ -1.94
MMP3P08254 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.95□□□□□ -1.94
MMP3P08254 AC016727.1-205ENST00000605437 569 ntBASIC2.95□□□□□ -1.94
MMP3P08254 AC107294.3-201ENST00000609211 526 ntBASIC2.95□□□□□ -1.94
MMP3P08254 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.95□□□□□ -1.94
MMP3P08254 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.95□□□□□ -1.94
MMP3P08254 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.95□□□□□ -1.94
MMP3P08254 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.95□□□□□ -1.94
MMP3P08254 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.95□□□□□ -1.94
MMP3P08254 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.95□□□□□ -1.94
MMP3P08254 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.94□□□□□ -1.94
MMP3P08254 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.94□□□□□ -1.94
MMP3P08254 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
MMP3P08254 AC006026.1-201ENST00000444025 1803 ntBASIC2.94□□□□□ -1.94
MMP3P08254 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
MMP3P08254 Y_RNA.339-201ENST00000365325 102 ntBASIC2.94□□□□□ -1.94
MMP3P08254 Y_RNA.473-201ENST00000384333 102 ntBASIC2.94□□□□□ -1.94
MMP3P08254 RNU6-306P-201ENST00000384617 107 ntBASIC2.94□□□□□ -1.94
MMP3P08254 RNU6-1077P-201ENST00000410506 102 ntBASIC2.94□□□□□ -1.94
MMP3P08254 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.94□□□□□ -1.94
MMP3P08254 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.94□□□□□ -1.94
MMP3P08254 AC009963.1-201ENST00000417265 157 ntBASIC2.94□□□□□ -1.94
MMP3P08254 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.94□□□□□ -1.94
MMP3P08254 TOMM20P4-201ENST00000427861 435 ntBASIC2.94□□□□□ -1.94
MMP3P08254 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.94□□□□□ -1.94
MMP3P08254 MTND1P17-201ENST00000448961 204 ntBASIC2.94□□□□□ -1.94
MMP3P08254 NDUFB1P2-201ENST00000449477 176 ntBASIC2.94□□□□□ -1.94
MMP3P08254 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.94□□□□□ -1.94
MMP3P08254 AL031183.1-201ENST00000457667 207 ntBASIC2.94□□□□□ -1.94
MMP3P08254 AC130509.1-201ENST00000464158 433 ntBASIC2.94□□□□□ -1.94
MMP3P08254 RPL39P5-202ENST00000512505 151 ntBASIC2.94□□□□□ -1.94
MMP3P08254 RNA5SP385-201ENST00000515947 110 ntBASIC2.94□□□□□ -1.94
MMP3P08254 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.94□□□□□ -1.94
MMP3P08254 AP002770.2-201ENST00000543613 532 ntBASIC2.94□□□□□ -1.94
MMP3P08254 MIR4635-201ENST00000583759 79 ntBASIC2.94□□□□□ -1.94
MMP3P08254 AC008121.1-201ENST00000603244 268 ntBASIC2.94□□□□□ -1.94
MMP3P08254 AL355598.1-201ENST00000604169 202 ntBASIC2.94□□□□□ -1.94
MMP3P08254 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
MMP3P08254 AC011890.2-201ENST00000613393 294 ntBASIC2.94□□□□□ -1.94
MMP3P08254 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.94□□□□□ -1.94
MMP3P08254 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
MMP3P08254 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
MMP3P08254 AC022336.2-201ENST00000568966 2538 ntBASIC2.93□□□□□ -1.94
MMP3P08254 SNORD62.1-201ENST00000362541 86 ntBASIC2.93□□□□□ -1.94
MMP3P08254 RNU4-79P-201ENST00000362764 141 ntBASIC2.93□□□□□ -1.94
MMP3P08254 RNU6-198P-201ENST00000384258 104 ntBASIC2.93□□□□□ -1.94
MMP3P08254 RNU6-95P-201ENST00000384697 107 ntBASIC2.93□□□□□ -1.94
MMP3P08254 AC098831.1-201ENST00000440661 216 ntBASIC2.93□□□□□ -1.94
MMP3P08254 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.93□□□□□ -1.94
MMP3P08254 AC107399.1-201ENST00000451226 265 ntBASIC2.93□□□□□ -1.94
MMP3P08254 RPL23AP45-201ENST00000476406 468 ntBASIC2.93□□□□□ -1.94
MMP3P08254 RPS27P27-201ENST00000498779 255 ntBASIC2.93□□□□□ -1.94
MMP3P08254 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.93□□□□□ -1.94
MMP3P08254 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.93□□□□□ -1.94
MMP3P08254 SNORA9.3-201ENST00000516383 129 ntBASIC2.93□□□□□ -1.94
MMP3P08254 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MMP3P08254 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.93□□□□□ -1.94
MMP3P08254 AC109329.2-201ENST00000519658 482 ntBASIC2.93□□□□□ -1.94
MMP3P08254 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.93□□□□□ -1.94
MMP3P08254 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.93□□□□□ -1.94
MMP3P08254 AC026371.1-201ENST00000551867 419 ntBASIC2.93□□□□□ -1.94
MMP3P08254 MTND4LP32-201ENST00000636111 270 ntBASIC2.93□□□□□ -1.94
MMP3P08254 MAPK10-322ENST00000641485 4530 ntBASIC2.93□□□□□ -1.94
MMP3P08254 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
MMP3P08254 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MMP3P08254 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.92□□□□□ -1.94
MMP3P08254 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
MMP3P08254 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.92□□□□□ -1.94
MMP3P08254 RNU6-827P-201ENST00000365553 106 ntBASIC2.92□□□□□ -1.94
MMP3P08254 RNU6-1329P-201ENST00000365664 107 ntBASIC2.92□□□□□ -1.94
MMP3P08254 Y_RNA.419-201ENST00000384041 102 ntBASIC2.92□□□□□ -1.94
MMP3P08254 RNU6-214P-201ENST00000384130 107 ntBASIC2.92□□□□□ -1.94
MMP3P08254 RNU6-72P-201ENST00000384285 79 ntBASIC2.92□□□□□ -1.94
MMP3P08254 Y_RNA.535-201ENST00000384612 99 ntBASIC2.92□□□□□ -1.94
MMP3P08254 SNORD56-201ENST00000413522 71 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms