Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.54□□□□□ -2.16
ERCC1P07992 AC137800.2-201ENST00000574375 120 ntBASIC1.54□□□□□ -2.16
ERCC1P07992 MIR5697-201ENST00000578045 78 ntBASIC1.54□□□□□ -2.16
ERCC1P07992 MIR5692A1-201ENST00000580523 69 ntBASIC1.54□□□□□ -2.16
ERCC1P07992 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.54□□□□□ -2.16
ERCC1P07992 MIR1248-201ENST00000629190 106 ntBASIC1.54□□□□□ -2.16
ERCC1P07992 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.54□□□□□ -2.16
ERCC1P07992 AC006927.3-201ENST00000638789 384 ntBASIC1.54□□□□□ -2.16
ERCC1P07992 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ERCC1P07992 CBX3P1-201ENST00000325243 554 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 RNU6-78P-201ENST00000362897 107 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 SNORD48-201ENST00000364953 64 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 MIR30A-201ENST00000385092 71 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
ERCC1P07992 SNORA48.1-201ENST00000390879 135 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.53□□□□□ -2.16
ERCC1P07992 RPL21P90-201ENST00000415692 466 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 AL589872.1-201ENST00000426602 288 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.53□□□□□ -2.16
ERCC1P07992 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.53□□□□□ -2.16
ERCC1P07992 RPL39P29-201ENST00000447779 157 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 HMGN2P23-201ENST00000456759 269 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.53□□□□□ -2.16
ERCC1P07992 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
ERCC1P07992 RBBP4P6-201ENST00000508098 202 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.53□□□□□ -2.16
ERCC1P07992 RNU1-86P-201ENST00000516108 154 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 RNU1-107P-201ENST00000516617 154 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.53□□□□□ -2.16
ERCC1P07992 AK6P1-201ENST00000540219 478 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ERCC1P07992 AC008521.1-201ENST00000587471 187 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 AC022022.2-201ENST00000602989 360 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 AC010900.2-201ENST00000604508 210 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 AC138749.5-201ENST00000611461 208 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 AC063943.3-201ENST00000615562 356 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 AC116165.2-201ENST00000616705 206 ntBASIC1.53□□□□□ -2.16
ERCC1P07992 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.53□□□□□ -2.16
ERCC1P07992 ZNF680P1-201ENST00000436625 1469 ntBASIC1.52□□□□□ -2.17
ERCC1P07992 MIR126-201ENST00000362291 85 ntBASIC1.52□□□□□ -2.17
ERCC1P07992 RNU6-997P-201ENST00000384725 107 ntBASIC1.52□□□□□ -2.17
ERCC1P07992 MTND4P20-201ENST00000424125 869 ntBASIC1.52□□□□□ -2.17
ERCC1P07992 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.52□□□□□ -2.17
ERCC1P07992 MTCYBP39-201ENST00000437562 491 ntBASIC1.52□□□□□ -2.17
ERCC1P07992 AC007969.2-201ENST00000441891 191 ntBASIC1.52□□□□□ -2.17
ERCC1P07992 AL035666.1-201ENST00000446195 348 ntBASIC1.52□□□□□ -2.17
ERCC1P07992 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.52□□□□□ -2.17
ERCC1P07992 MTND2P39-201ENST00000457230 764 ntBASIC1.52□□□□□ -2.17
ERCC1P07992 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.52□□□□□ -2.17
ERCC1P07992 RNU6-991P-201ENST00000516168 107 ntBASIC1.52□□□□□ -2.17
ERCC1P07992 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.52□□□□□ -2.17
ERCC1P07992 MTND2P7-201ENST00000521337 640 ntBASIC1.52□□□□□ -2.17
ERCC1P07992 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.52□□□□□ -2.17
ERCC1P07992 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.52□□□□□ -2.17
ERCC1P07992 RMST_4.1-201ENST00000616886 107 ntBASIC1.52□□□□□ -2.17
ERCC1P07992 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ERCC1P07992 RNU6-23P-201ENST00000363283 107 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 RNA5SP99-201ENST00000364020 114 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 RNU5E-7P-201ENST00000365290 117 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 RNU6-61P-201ENST00000365528 109 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.51□□□□□ -2.17
ERCC1P07992 RNU6-160P-201ENST00000384591 107 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 RNU6-387P-201ENST00000411331 105 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ERCC1P07992 AL591043.1-201ENST00000432461 424 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 AL512286.1-201ENST00000439244 400 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.51□□□□□ -2.17
ERCC1P07992 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.51□□□□□ -2.17
ERCC1P07992 FAM206BP-201ENST00000510179 541 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 AC009646.1-201ENST00000510455 318 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.51□□□□□ -2.17
ERCC1P07992 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.51□□□□□ -2.17
ERCC1P07992 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.51□□□□□ -2.17
ERCC1P07992 AC016925.2-201ENST00000605108 242 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 AP000654.2-201ENST00000605633 586 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 AP000240.1-201ENST00000609910 452 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 AC009878.1-201ENST00000621819 340 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.51□□□□□ -2.17
ERCC1P07992 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ERCC1P07992 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.51□□□□□ -2.17
ERCC1P07992 AC233981.2-201ENST00000611524 1614 ntBASIC1.51□□□□□ -2.17
ERCC1P07992 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
ERCC1P07992 SNORA62.1-201ENST00000364287 154 ntBASIC1.5□□□□□ -2.17
ERCC1P07992 RNA5SP190-201ENST00000365222 118 ntBASIC1.5□□□□□ -2.17
ERCC1P07992 RNA5SP100-201ENST00000410903 110 ntBASIC1.5□□□□□ -2.17
ERCC1P07992 RNA5SP59-201ENST00000410922 110 ntBASIC1.5□□□□□ -2.17
ERCC1P07992 C1DP2-201ENST00000418167 426 ntBASIC1.5□□□□□ -2.17
ERCC1P07992 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.5□□□□□ -2.17
ERCC1P07992 AC112492.4-201ENST00000456549 352 ntBASIC1.5□□□□□ -2.17
ERCC1P07992 AL122001.1-201ENST00000457027 370 ntBASIC1.5□□□□□ -2.17
ERCC1P07992 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.5□□□□□ -2.17
ERCC1P07992 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.5□□□□□ -2.17
ERCC1P07992 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.5□□□□□ -2.17
ERCC1P07992 AP005435.4-201ENST00000529514 284 ntBASIC1.5□□□□□ -2.17
ERCC1P07992 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.5□□□□□ -2.17
ERCC1P07992 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.5□□□□□ -2.17
ERCC1P07992 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.5□□□□□ -2.17
ERCC1P07992 AC130454.1-201ENST00000622948 401 ntBASIC1.5□□□□□ -2.17
ERCC1P07992 AL078595.3-201ENST00000623815 1166 ntBASIC1.5□□□□□ -2.17
ERCC1P07992 AC019226.2-201ENST00000625973 424 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 306.7 ms