Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RPL30P1-201ENST00000488676 339 ntBASIC1.96□□□□□ -2.1
MBD3O95983 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.96□□□□□ -2.1
MBD3O95983 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.96□□□□□ -2.1
MBD3O95983 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.96□□□□□ -2.1
MBD3O95983 OR5AL2P-201ENST00000532185 920 ntBASIC1.96□□□□□ -2.1
MBD3O95983 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.96□□□□□ -2.1
MBD3O95983 AC012414.6-201ENST00000568241 401 ntBASIC1.96□□□□□ -2.1
MBD3O95983 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.96□□□□□ -2.1
MBD3O95983 AL031274.2-201ENST00000599419 203 ntBASIC1.96□□□□□ -2.1
MBD3O95983 MIR98-201ENST00000606724 119 ntBASIC1.96□□□□□ -2.1
MBD3O95983 AC109347.2-201ENST00000610220 349 ntBASIC1.96□□□□□ -2.1
MBD3O95983 IGHVIII-44-202ENST00000636235 289 ntBASIC1.96□□□□□ -2.1
MBD3O95983 U4.7-201ENST00000638126 106 ntBASIC1.96□□□□□ -2.1
MBD3O95983 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.95□□□□□ -2.1
MBD3O95983 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
MBD3O95983 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.95□□□□□ -2.1
MBD3O95983 RNU6-78P-201ENST00000362897 107 ntBASIC1.95□□□□□ -2.1
MBD3O95983 RNU6-1287P-201ENST00000362914 107 ntBASIC1.95□□□□□ -2.1
MBD3O95983 RNU4-48P-201ENST00000365559 182 ntBASIC1.95□□□□□ -2.1
MBD3O95983 RNU6-116P-201ENST00000384042 109 ntBASIC1.95□□□□□ -2.1
MBD3O95983 RNU6-1060P-201ENST00000384664 107 ntBASIC1.95□□□□□ -2.1
MBD3O95983 MIR9-3-201ENST00000385084 90 ntBASIC1.95□□□□□ -2.1
MBD3O95983 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.95□□□□□ -2.1
MBD3O95983 RNU6-1140P-201ENST00000410517 106 ntBASIC1.95□□□□□ -2.1
MBD3O95983 RNU4-46P-201ENST00000410818 138 ntBASIC1.95□□□□□ -2.1
MBD3O95983 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.95□□□□□ -2.1
MBD3O95983 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.95□□□□□ -2.1
MBD3O95983 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.95□□□□□ -2.1
MBD3O95983 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.95□□□□□ -2.1
MBD3O95983 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.95□□□□□ -2.1
MBD3O95983 AL137159.1-201ENST00000452808 512 ntBASIC1.95□□□□□ -2.1
MBD3O95983 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.95□□□□□ -2.1
MBD3O95983 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.95□□□□□ -2.1
MBD3O95983 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.95□□□□□ -2.1
MBD3O95983 AC010486.2-201ENST00000505572 483 ntBASIC1.95□□□□□ -2.1
MBD3O95983 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MBD3O95983 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.95□□□□□ -2.1
MBD3O95983 SNORA18.6-201ENST00000516792 115 ntBASIC1.95□□□□□ -2.1
MBD3O95983 AP005435.4-201ENST00000529514 284 ntBASIC1.95□□□□□ -2.1
MBD3O95983 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.95□□□□□ -2.1
MBD3O95983 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.95□□□□□ -2.1
MBD3O95983 AL359314.1-201ENST00000616913 261 ntBASIC1.95□□□□□ -2.1
MBD3O95983 AC091931.1-201ENST00000623488 728 ntBASIC1.95□□□□□ -2.1
MBD3O95983 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.95□□□□□ -2.1
MBD3O95983 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MBD3O95983 Y_RNA.40-201ENST00000362645 93 ntBASIC1.94□□□□□ -2.1
MBD3O95983 RNU5E-7P-201ENST00000365290 117 ntBASIC1.94□□□□□ -2.1
MBD3O95983 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
MBD3O95983 RNU6-1032P-201ENST00000384100 107 ntBASIC1.94□□□□□ -2.1
MBD3O95983 AL079342.1-201ENST00000401460 267 ntBASIC1.94□□□□□ -2.1
MBD3O95983 AL512604.1-201ENST00000404812 257 ntBASIC1.94□□□□□ -2.1
MBD3O95983 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.94□□□□□ -2.1
MBD3O95983 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.94□□□□□ -2.1
MBD3O95983 AC096920.1-201ENST00000423991 241 ntBASIC1.94□□□□□ -2.1
MBD3O95983 RPL31P35-201ENST00000431058 377 ntBASIC1.94□□□□□ -2.1
MBD3O95983 AL645568.3-201ENST00000433683 316 ntBASIC1.94□□□□□ -2.1
MBD3O95983 RPL38P4-201ENST00000502376 214 ntBASIC1.94□□□□□ -2.1
MBD3O95983 MTCO3P28-201ENST00000513351 515 ntBASIC1.94□□□□□ -2.1
MBD3O95983 MIR3941-201ENST00000582572 103 ntBASIC1.94□□□□□ -2.1
MBD3O95983 AC008945.2-201ENST00000606056 604 ntBASIC1.94□□□□□ -2.1
MBD3O95983 AL627230.6-201ENST00000611129 280 ntBASIC1.94□□□□□ -2.1
MBD3O95983 AL132822.1-201ENST00000617063 513 ntBASIC1.94□□□□□ -2.1
MBD3O95983 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MBD3O95983 SNORD56.1-201ENST00000362913 68 ntBASIC1.93□□□□□ -2.1
MBD3O95983 SNORA62.1-201ENST00000364287 154 ntBASIC1.93□□□□□ -2.1
MBD3O95983 U3.13-201ENST00000364804 214 ntBASIC1.93□□□□□ -2.1
MBD3O95983 RNU6-546P-201ENST00000383991 107 ntBASIC1.93□□□□□ -2.1
MBD3O95983 RNU6-606P-201ENST00000384721 111 ntBASIC1.93□□□□□ -2.1
MBD3O95983 MIR29C-201ENST00000385231 88 ntBASIC1.93□□□□□ -2.1
MBD3O95983 RNU6-195P-201ENST00000411352 109 ntBASIC1.93□□□□□ -2.1
MBD3O95983 C1DP2-201ENST00000418167 426 ntBASIC1.93□□□□□ -2.1
MBD3O95983 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.93□□□□□ -2.1
MBD3O95983 AL445685.2-201ENST00000422551 342 ntBASIC1.93□□□□□ -2.1
MBD3O95983 AL669831.1-202ENST00000428504 417 ntBASIC1.93□□□□□ -2.1
MBD3O95983 AC133104.1-201ENST00000429100 218 ntBASIC1.93□□□□□ -2.1
MBD3O95983 GTF2IP13-201ENST00000438487 386 ntBASIC1.93□□□□□ -2.1
MBD3O95983 AC003989.2-201ENST00000440224 169 ntBASIC1.93□□□□□ -2.1
MBD3O95983 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.93□□□□□ -2.1
MBD3O95983 RPL23AP42-201ENST00000471152 471 ntBASIC1.93□□□□□ -2.1
MBD3O95983 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.93□□□□□ -2.1
MBD3O95983 HSPE1P18-201ENST00000517602 280 ntBASIC1.93□□□□□ -2.1
MBD3O95983 AC109479.2-201ENST00000517842 174 ntBASIC1.93□□□□□ -2.1
MBD3O95983 AC060788.1-201ENST00000521318 469 ntBASIC1.93□□□□□ -2.1
MBD3O95983 AC022616.8-201ENST00000533569 253 ntBASIC1.93□□□□□ -2.1
MBD3O95983 AP000763.2-201ENST00000540641 163 ntBASIC1.93□□□□□ -2.1
MBD3O95983 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.93□□□□□ -2.1
MBD3O95983 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
MBD3O95983 AC009161.2-201ENST00000624626 138 ntBASIC1.93□□□□□ -2.1
MBD3O95983 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.93□□□□□ -2.1
MBD3O95983 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
MBD3O95983 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MBD3O95983 RNU4-82P-201ENST00000362443 140 ntBASIC1.92□□□□□ -2.1
MBD3O95983 Y_RNA.324-201ENST00000365165 102 ntBASIC1.92□□□□□ -2.1
MBD3O95983 Y_RNA.480-201ENST00000384364 102 ntBASIC1.92□□□□□ -2.1
MBD3O95983 RNU6-1274P-201ENST00000384557 107 ntBASIC1.92□□□□□ -2.1
MBD3O95983 RNU6-1222P-201ENST00000384615 107 ntBASIC1.92□□□□□ -2.1
MBD3O95983 MIR518A2-201ENST00000384966 87 ntBASIC1.92□□□□□ -2.1
MBD3O95983 AC019129.1-201ENST00000403786 261 ntBASIC1.92□□□□□ -2.1
MBD3O95983 RN7SKP284-201ENST00000411002 343 ntBASIC1.92□□□□□ -2.1
MBD3O95983 RNA5SP508-201ENST00000411327 119 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms