Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.87□□□□□ -1.95
DDX58O95786 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.87□□□□□ -1.95
DDX58O95786 MIR3670-2-201ENST00000582974 65 ntBASIC2.87□□□□□ -1.95
DDX58O95786 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.87□□□□□ -1.95
DDX58O95786 MIR3670-1-201ENST00000584160 65 ntBASIC2.87□□□□□ -1.95
DDX58O95786 MIR3670-3-201ENST00000584855 65 ntBASIC2.87□□□□□ -1.95
DDX58O95786 AL356575.1-201ENST00000603008 283 ntBASIC2.87□□□□□ -1.95
DDX58O95786 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.87□□□□□ -1.95
DDX58O95786 AC092954.2-201ENST00000609103 430 ntBASIC2.87□□□□□ -1.95
DDX58O95786 U2.17-201ENST00000611454 95 ntBASIC2.87□□□□□ -1.95
DDX58O95786 MIR3670-4-201ENST00000612260 65 ntBASIC2.87□□□□□ -1.95
DDX58O95786 RMST_4.1-201ENST00000616886 107 ntBASIC2.87□□□□□ -1.95
DDX58O95786 MAPK10-266ENST00000641066 6555 ntBASIC2.86□□□□□ -1.95
DDX58O95786 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
DDX58O95786 MIR6073-201ENST00000352083 89 ntBASIC2.86□□□□□ -1.95
DDX58O95786 RNU6-942P-201ENST00000363002 107 ntBASIC2.86□□□□□ -1.95
DDX58O95786 RNU6-527P-201ENST00000363425 104 ntBASIC2.86□□□□□ -1.95
DDX58O95786 Y_RNA.324-201ENST00000365165 102 ntBASIC2.86□□□□□ -1.95
DDX58O95786 RNU6-843P-201ENST00000384454 104 ntBASIC2.86□□□□□ -1.95
DDX58O95786 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
DDX58O95786 RNU2-3P-201ENST00000410144 191 ntBASIC2.86□□□□□ -1.95
DDX58O95786 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.86□□□□□ -1.95
DDX58O95786 CYCSP33-201ENST00000414485 327 ntBASIC2.86□□□□□ -1.95
DDX58O95786 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX58O95786 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.86□□□□□ -1.95
DDX58O95786 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.86□□□□□ -1.95
DDX58O95786 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
DDX58O95786 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX58O95786 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX58O95786 RNU7-180P-201ENST00000459240 63 ntBASIC2.86□□□□□ -1.95
DDX58O95786 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.86□□□□□ -1.95
DDX58O95786 AC018437.1-201ENST00000492214 406 ntBASIC2.86□□□□□ -1.95
DDX58O95786 SNORA43.2-201ENST00000516652 128 ntBASIC2.86□□□□□ -1.95
DDX58O95786 AC079598.5-201ENST00000547460 117 ntBASIC2.86□□□□□ -1.95
DDX58O95786 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
DDX58O95786 HMGB1P33-201ENST00000563485 527 ntBASIC2.86□□□□□ -1.95
DDX58O95786 LRRC37A5P-203ENST00000580181 585 ntBASIC2.86□□□□□ -1.95
DDX58O95786 AC025165.5-201ENST00000602802 578 ntBASIC2.86□□□□□ -1.95
DDX58O95786 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
DDX58O95786 AP003400.5-201ENST00000624827 617 ntBASIC2.86□□□□□ -1.95
DDX58O95786 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.86□□□□□ -1.95
DDX58O95786 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
DDX58O95786 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
DDX58O95786 RNU6-483P-201ENST00000384088 108 ntBASIC2.85□□□□□ -1.95
DDX58O95786 RNU6-1072P-201ENST00000384703 107 ntBASIC2.85□□□□□ -1.95
DDX58O95786 RNU6-443P-201ENST00000384780 107 ntBASIC2.85□□□□□ -1.95
DDX58O95786 MIR221-201ENST00000385135 110 ntBASIC2.85□□□□□ -1.95
DDX58O95786 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
DDX58O95786 MTND1P34-201ENST00000438556 671 ntBASIC2.85□□□□□ -1.95
DDX58O95786 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.85□□□□□ -1.95
DDX58O95786 AC096638.1-201ENST00000444678 216 ntBASIC2.85□□□□□ -1.95
DDX58O95786 AL513124.1-201ENST00000450410 614 ntBASIC2.85□□□□□ -1.95
DDX58O95786 AP000705.1-201ENST00000454567 350 ntBASIC2.85□□□□□ -1.95
DDX58O95786 AC019235.1-201ENST00000503847 207 ntBASIC2.85□□□□□ -1.95
DDX58O95786 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
DDX58O95786 RNU6-1281P-201ENST00000516223 105 ntBASIC2.85□□□□□ -1.95
DDX58O95786 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.85□□□□□ -1.95
DDX58O95786 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.85□□□□□ -1.95
DDX58O95786 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.85□□□□□ -1.95
DDX58O95786 EIF1P4-201ENST00000572664 335 ntBASIC2.85□□□□□ -1.95
DDX58O95786 MIR4648-201ENST00000580107 72 ntBASIC2.85□□□□□ -1.95
DDX58O95786 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.85□□□□□ -1.95
DDX58O95786 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.85□□□□□ -1.95
DDX58O95786 MIR5739-201ENST00000619803 80 ntBASIC2.85□□□□□ -1.95
DDX58O95786 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
DDX58O95786 HAUS6P2-201ENST00000433254 2404 ntBASIC2.85□□□□□ -1.95
DDX58O95786 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
DDX58O95786 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-37P-201ENST00000362692 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 SNORD56.1-201ENST00000362913 68 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-11P-201ENST00000364234 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU4-66P-201ENST00000365199 138 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU1-51P-201ENST00000365345 176 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-25P-201ENST00000383873 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-1-201ENST00000383898 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-48P-201ENST00000384161 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-36P-201ENST00000384172 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-4P-201ENST00000384205 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-5P-201ENST00000384238 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-3P-201ENST00000384314 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 Y_RNA.480-201ENST00000384364 102 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-16P-201ENST00000384385 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-15P-201ENST00000384534 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-2-201ENST00000384627 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-29P-201ENST00000384637 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-9-201ENST00000384776 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RNU6-33P-201ENST00000384793 107 ntBASIC2.84□□□□□ -1.95
DDX58O95786 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.84□□□□□ -1.95
DDX58O95786 RNU2-63P-201ENST00000410792 194 ntBASIC2.84□□□□□ -1.95
DDX58O95786 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.84□□□□□ -1.95
DDX58O95786 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.84□□□□□ -1.95
DDX58O95786 MTCO1P21-201ENST00000416634 589 ntBASIC2.84□□□□□ -1.95
DDX58O95786 AL096701.2-201ENST00000416920 238 ntBASIC2.84□□□□□ -1.95
DDX58O95786 CYCSP48-201ENST00000417124 323 ntBASIC2.84□□□□□ -1.95
DDX58O95786 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.84□□□□□ -1.95
DDX58O95786 RPS3AP44-201ENST00000425466 790 ntBASIC2.84□□□□□ -1.95
DDX58O95786 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.84□□□□□ -1.95
DDX58O95786 AL591043.1-201ENST00000432461 424 ntBASIC2.84□□□□□ -1.95
DDX58O95786 MTND3P21-201ENST00000433774 331 ntBASIC2.84□□□□□ -1.95
DDX58O95786 RPS29P21-201ENST00000496272 170 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms