Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.81□□□□□ -1.96
RTN3O95197 SNORA14.1-201ENST00000516113 141 ntBASIC2.81□□□□□ -1.96
RTN3O95197 AC109635.3-201ENST00000529536 185 ntBASIC2.81□□□□□ -1.96
RTN3O95197 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
RTN3O95197 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.81□□□□□ -1.96
RTN3O95197 AC027176.1-201ENST00000560204 514 ntBASIC2.81□□□□□ -1.96
RTN3O95197 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.81□□□□□ -1.96
RTN3O95197 MIR5571-201ENST00000577998 113 ntBASIC2.81□□□□□ -1.96
RTN3O95197 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.81□□□□□ -1.96
RTN3O95197 AC073410.2-201ENST00000603240 332 ntBASIC2.81□□□□□ -1.96
RTN3O95197 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RTN3O95197 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RTN3O95197 AL136360.1-201ENST00000503377 1900 ntBASIC2.8□□□□□ -1.96
RTN3O95197 OR4G1P-203ENST00000641984 1631 ntBASIC2.8□□□□□ -1.96
RTN3O95197 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.8□□□□□ -1.96
RTN3O95197 Y_RNA.231-201ENST00000364358 102 ntBASIC2.8□□□□□ -1.96
RTN3O95197 RNU1-57P-201ENST00000384491 166 ntBASIC2.8□□□□□ -1.96
RTN3O95197 RNU6-1140P-201ENST00000410517 106 ntBASIC2.8□□□□□ -1.96
RTN3O95197 EIF4EP4-201ENST00000424916 578 ntBASIC2.8□□□□□ -1.96
RTN3O95197 MTCO1P20-201ENST00000425366 358 ntBASIC2.8□□□□□ -1.96
RTN3O95197 RPS3AP44-201ENST00000425466 790 ntBASIC2.8□□□□□ -1.96
RTN3O95197 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.8□□□□□ -1.96
RTN3O95197 RPL32P28-201ENST00000443577 397 ntBASIC2.8□□□□□ -1.96
RTN3O95197 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.8□□□□□ -1.96
RTN3O95197 RNU6-1038P-201ENST00000516516 104 ntBASIC2.8□□□□□ -1.96
RTN3O95197 SNORA31.11-201ENST00000516528 139 ntBASIC2.8□□□□□ -1.96
RTN3O95197 CKS1BP7-201ENST00000522230 235 ntBASIC2.8□□□□□ -1.96
RTN3O95197 COPS8P3-201ENST00000526024 482 ntBASIC2.8□□□□□ -1.96
RTN3O95197 AL118558.2-201ENST00000556294 238 ntBASIC2.8□□□□□ -1.96
RTN3O95197 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.8□□□□□ -1.96
RTN3O95197 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RTN3O95197 MIR6073-201ENST00000352083 89 ntBASIC2.79□□□□□ -1.96
RTN3O95197 Y_RNA.6-201ENST00000362350 114 ntBASIC2.79□□□□□ -1.96
RTN3O95197 RNU6-105P-201ENST00000363909 104 ntBASIC2.79□□□□□ -1.96
RTN3O95197 Y_RNA.378-201ENST00000365652 113 ntBASIC2.79□□□□□ -1.96
RTN3O95197 Y_RNA.554-201ENST00000384672 102 ntBASIC2.79□□□□□ -1.96
RTN3O95197 AL356057.3-201ENST00000402607 340 ntBASIC2.79□□□□□ -1.96
RTN3O95197 OOSP1P1-201ENST00000423265 274 ntBASIC2.79□□□□□ -1.96
RTN3O95197 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.79□□□□□ -1.96
RTN3O95197 RNU7-138P-201ENST00000459479 64 ntBASIC2.79□□□□□ -1.96
RTN3O95197 RNU6-1208P-201ENST00000459588 107 ntBASIC2.79□□□□□ -1.96
RTN3O95197 AC087884.1-201ENST00000469738 328 ntBASIC2.79□□□□□ -1.96
RTN3O95197 AC117503.1-201ENST00000472241 394 ntBASIC2.79□□□□□ -1.96
RTN3O95197 AC090096.1-201ENST00000489168 390 ntBASIC2.79□□□□□ -1.96
RTN3O95197 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.79□□□□□ -1.96
RTN3O95197 RNA5SP282-201ENST00000516355 108 ntBASIC2.79□□□□□ -1.96
RTN3O95197 PSMA3P-201ENST00000555485 635 ntBASIC2.79□□□□□ -1.96
RTN3O95197 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.79□□□□□ -1.96
RTN3O95197 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.79□□□□□ -1.96
RTN3O95197 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.79□□□□□ -1.96
RTN3O95197 AC068790.6-201ENST00000602558 258 ntBASIC2.79□□□□□ -1.96
RTN3O95197 RNU6-85P-201ENST00000605989 107 ntBASIC2.79□□□□□ -1.96
RTN3O95197 AC092807.2-201ENST00000609367 243 ntBASIC2.79□□□□□ -1.96
RTN3O95197 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.79□□□□□ -1.96
RTN3O95197 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.79□□□□□ -1.96
RTN3O95197 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
RTN3O95197 AC002543.1-201ENST00000299783 1954 ntBASIC2.78□□□□□ -1.96
RTN3O95197 RNY4P14-201ENST00000363656 96 ntBASIC2.78□□□□□ -1.96
RTN3O95197 RNY3P3-201ENST00000363816 102 ntBASIC2.78□□□□□ -1.96
RTN3O95197 RNU6-1090P-201ENST00000364065 94 ntBASIC2.78□□□□□ -1.96
RTN3O95197 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
RTN3O95197 RNU2-23P-201ENST00000410545 195 ntBASIC2.78□□□□□ -1.96
RTN3O95197 RNU6-1245P-201ENST00000411130 106 ntBASIC2.78□□□□□ -1.96
RTN3O95197 AL139413.1-201ENST00000421309 217 ntBASIC2.78□□□□□ -1.96
RTN3O95197 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.78□□□□□ -1.96
RTN3O95197 ERLEC1P1-201ENST00000433806 578 ntBASIC2.78□□□□□ -1.96
RTN3O95197 AC007969.2-201ENST00000441891 191 ntBASIC2.78□□□□□ -1.96
RTN3O95197 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.78□□□□□ -1.96
RTN3O95197 AL031274.1-201ENST00000450334 232 ntBASIC2.78□□□□□ -1.96
RTN3O95197 AC013470.1-201ENST00000453438 462 ntBASIC2.78□□□□□ -1.96
RTN3O95197 AC082651.2-201ENST00000496833 166 ntBASIC2.78□□□□□ -1.96
RTN3O95197 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.78□□□□□ -1.96
RTN3O95197 RNA5SP402-201ENST00000517148 110 ntBASIC2.78□□□□□ -1.96
RTN3O95197 MIR5194-201ENST00000582634 120 ntBASIC2.78□□□□□ -1.96
RTN3O95197 MIR4635-201ENST00000583759 79 ntBASIC2.78□□□□□ -1.96
RTN3O95197 uc_338.15-201ENST00000615470 191 ntBASIC2.78□□□□□ -1.96
RTN3O95197 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.78□□□□□ -1.96
RTN3O95197 AC007792.1-201ENST00000623023 402 ntBASIC2.78□□□□□ -1.96
RTN3O95197 AC098679.4-201ENST00000624241 654 ntBASIC2.78□□□□□ -1.96
RTN3O95197 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RTN3O95197 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RTN3O95197 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
RTN3O95197 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RTN3O95197 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.78□□□□□ -1.96
RTN3O95197 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.77□□□□□ -1.97
RTN3O95197 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RTN3O95197 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.77□□□□□ -1.97
RTN3O95197 AL117339.3-201ENST00000418733 162 ntBASIC2.77□□□□□ -1.97
RTN3O95197 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.77□□□□□ -1.97
RTN3O95197 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.77□□□□□ -1.97
RTN3O95197 AC124916.1-201ENST00000444020 547 ntBASIC2.77□□□□□ -1.97
RTN3O95197 RNU7-26P-201ENST00000458980 63 ntBASIC2.77□□□□□ -1.97
RTN3O95197 AC140059.1-201ENST00000489238 361 ntBASIC2.77□□□□□ -1.97
RTN3O95197 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.77□□□□□ -1.97
RTN3O95197 AC008526.1-201ENST00000509149 338 ntBASIC2.77□□□□□ -1.97
RTN3O95197 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.77□□□□□ -1.97
RTN3O95197 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.77□□□□□ -1.97
RTN3O95197 AC010525.2-201ENST00000590920 195 ntBASIC2.77□□□□□ -1.97
RTN3O95197 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RTN3O95197 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms