Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.12□□□□□ -2.07
UBE4BO95155 AL356292.1-201ENST00000283110 373 ntBASIC2.12□□□□□ -2.07
UBE4BO95155 Y_RNA.367-201ENST00000365544 101 ntBASIC2.12□□□□□ -2.07
UBE4BO95155 AL049545.1-201ENST00000401856 572 ntBASIC2.12□□□□□ -2.07
UBE4BO95155 HMGN2P38-201ENST00000423806 265 ntBASIC2.12□□□□□ -2.07
UBE4BO95155 AC000111.3-201ENST00000433478 193 ntBASIC2.12□□□□□ -2.07
UBE4BO95155 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.12□□□□□ -2.07
UBE4BO95155 RNU7-182P-201ENST00000459009 62 ntBASIC2.12□□□□□ -2.07
UBE4BO95155 RPL38P4-201ENST00000502376 214 ntBASIC2.12□□□□□ -2.07
UBE4BO95155 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.12□□□□□ -2.07
UBE4BO95155 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.12□□□□□ -2.07
UBE4BO95155 MTND3P25-201ENST00000509243 135 ntBASIC2.12□□□□□ -2.07
UBE4BO95155 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.12□□□□□ -2.07
UBE4BO95155 AC060788.1-201ENST00000521318 469 ntBASIC2.12□□□□□ -2.07
UBE4BO95155 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.12□□□□□ -2.07
UBE4BO95155 AC026271.5-201ENST00000577873 130 ntBASIC2.12□□□□□ -2.07
UBE4BO95155 AC090897.2-201ENST00000581715 130 ntBASIC2.12□□□□□ -2.07
UBE4BO95155 AL031274.2-201ENST00000599419 203 ntBASIC2.12□□□□□ -2.07
UBE4BO95155 CLIC4P2-201ENST00000601934 717 ntBASIC2.12□□□□□ -2.07
UBE4BO95155 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.12□□□□□ -2.07
UBE4BO95155 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.12□□□□□ -2.07
UBE4BO95155 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.11□□□□□ -2.07
UBE4BO95155 RNU6-527P-201ENST00000363425 104 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 Y_RNA.201-201ENST00000364052 96 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 RNU5E-7P-201ENST00000365290 117 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 RNU6-108P-201ENST00000365558 107 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 Y_RNA.466-201ENST00000384294 113 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 AL591034.2-201ENST00000402839 359 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 U3.40-201ENST00000408706 208 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 RNU2-23P-201ENST00000410545 195 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 RNU2-40P-201ENST00000410833 196 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 OR9R1P-201ENST00000412200 877 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 MTND3P17-201ENST00000416968 344 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 BX295541.1-201ENST00000417774 250 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.11□□□□□ -2.07
UBE4BO95155 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.11□□□□□ -2.07
UBE4BO95155 AL591043.1-201ENST00000432461 424 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 RPL30P12-201ENST00000474666 353 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 AP001025.1-201ENST00000486139 332 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 RPS27P21-201ENST00000486977 252 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.11□□□□□ -2.07
UBE4BO95155 SNORA31.25-201ENST00000517242 134 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 AC107953.1-201ENST00000522216 297 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 IMMP1LP2-201ENST00000552954 492 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 MIR4498-201ENST00000577599 66 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.11□□□□□ -2.07
UBE4BO95155 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.11□□□□□ -2.07
UBE4BO95155 AC064872.1-201ENST00000604823 1072 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 ELOCP5-201ENST00000604924 333 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
UBE4BO95155 AC011155.2-201ENST00000623202 216 ntBASIC2.11□□□□□ -2.07
UBE4BO95155 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
UBE4BO95155 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
UBE4BO95155 RNU1-23P-201ENST00000363361 144 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 RNU6-1210P-201ENST00000363775 107 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 RNU6-45P-201ENST00000384471 107 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 MIR454-201ENST00000390180 115 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.1□□□□□ -2.07
UBE4BO95155 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.1□□□□□ -2.07
UBE4BO95155 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.1□□□□□ -2.07
UBE4BO95155 AL022238.1-201ENST00000442557 355 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 MTCYBP1-201ENST00000454315 1119 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 AC022364.2-201ENST00000457963 554 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 MTND3P7-201ENST00000474435 343 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 RNA5SP445-201ENST00000515889 115 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 RNU6-1178P-201ENST00000516674 107 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 RNA5SP137-201ENST00000516833 135 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 RNA5SP503-201ENST00000517047 117 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 AC034114.1-201ENST00000520293 285 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.1□□□□□ -2.07
UBE4BO95155 AP003072.2-201ENST00000527756 676 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.1□□□□□ -2.07
UBE4BO95155 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 AC006566.1-201ENST00000608943 513 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 AC022202.1-201ENST00000613515 211 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.1□□□□□ -2.07
UBE4BO95155 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
UBE4BO95155 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
UBE4BO95155 U3.4-201ENST00000363352 213 ntBASIC2.09□□□□□ -2.08
UBE4BO95155 RNU6-456P-201ENST00000384493 107 ntBASIC2.09□□□□□ -2.08
UBE4BO95155 MIR1-2-201ENST00000384961 85 ntBASIC2.09□□□□□ -2.08
UBE4BO95155 RNU6-550P-201ENST00000391057 101 ntBASIC2.09□□□□□ -2.08
UBE4BO95155 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.09□□□□□ -2.08
UBE4BO95155 EIF1AXP1-201ENST00000419267 435 ntBASIC2.09□□□□□ -2.08
UBE4BO95155 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.09□□□□□ -2.08
UBE4BO95155 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.09□□□□□ -2.08
UBE4BO95155 AC055731.1-201ENST00000474387 401 ntBASIC2.09□□□□□ -2.08
UBE4BO95155 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.09□□□□□ -2.08
UBE4BO95155 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.09□□□□□ -2.08
UBE4BO95155 RNU2-19P-201ENST00000517288 84 ntBASIC2.09□□□□□ -2.08
UBE4BO95155 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.09□□□□□ -2.08
UBE4BO95155 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.09□□□□□ -2.08
UBE4BO95155 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.09□□□□□ -2.08
UBE4BO95155 MIR4448-201ENST00000584360 86 ntBASIC2.09□□□□□ -2.08
UBE4BO95155 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.09□□□□□ -2.08
UBE4BO95155 AC008945.2-201ENST00000606056 604 ntBASIC2.09□□□□□ -2.08
UBE4BO95155 RMST_4.1-201ENST00000616886 107 ntBASIC2.09□□□□□ -2.08
UBE4BO95155 AC098657.3-201ENST00000620434 263 ntBASIC2.09□□□□□ -2.08
UBE4BO95155 RMST_7.1-201ENST00000621935 268 ntBASIC2.09□□□□□ -2.08
UBE4BO95155 AL031601.2-202ENST00000622650 282 ntBASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms