Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SNORD115-2-201ENST00000362842 82 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 RNU6-225P-201ENST00000384613 103 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 MIR200A-201ENST00000384875 90 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 MIR514A1-201ENST00000385133 98 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 DSTNP4-201ENST00000399472 474 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 BTF3P8-201ENST00000414577 526 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 RAC1P8-201ENST00000427086 527 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.13□□□□□ -2.43
USH2AO75445 MTND4P32-201ENST00000437189 1237 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 SNRPGP6-201ENST00000451124 220 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
USH2AO75445 AL022345.2-201ENST00000606307 135 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 MIR95-201ENST00000385072 81 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 AL079342.2-201ENST00000403367 482 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 MTCYBP24-201ENST00000420387 1106 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 AC091885.1-201ENST00000506658 268 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 MIR4306-201ENST00000583390 91 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 AC019226.1-201ENST00000625666 515 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 MTND4LP21-201ENST00000415303 295 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC-0.13□□□□□ -2.43
USH2AO75445 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.13□□□□□ -2.43
USH2AO75445 MTCO3P2-201ENST00000457365 171 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 SNORA70.22-201ENST00000517160 124 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.13□□□□□ -2.43
USH2AO75445 HSPE1P7-201ENST00000604681 321 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 AC092106.3-201ENST00000611308 722 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC-0.13□□□□□ -2.43
USH2AO75445 ANKRD26P2-201ENST00000445530 1710 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 SNORD115-24-201ENST00000363528 82 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 U3.13-201ENST00000364804 214 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 RNU2-49P-201ENST00000410666 184 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.14□□□□□ -2.43
USH2AO75445 RAD1P2-201ENST00000446414 663 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 AC023194.1-201ENST00000493084 308 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 AL133241.1-201ENST00000556832 487 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 AC079791.1-201ENST00000605356 973 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.14□□□□□ -2.43
USH2AO75445 AL138880.2-201ENST00000616214 239 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 UCA1.1-201ENST00000620952 75 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 RNU2-3P-201ENST00000410144 191 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 EDDM3CP-201ENST00000415977 425 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 USP9YP29-201ENST00000445112 563 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 RNU6-953P-201ENST00000459154 107 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 AC107626.1-201ENST00000471084 183 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 AC010376.1-201ENST00000522101 334 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 AP003034.1-201ENST00000534621 422 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 AC025678.1-201ENST00000567861 338 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 SNORD114-5-201ENST00000362928 70 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 RNA5SP264-201ENST00000363115 107 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.14□□□□□ -2.43
USH2AO75445 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.14□□□□□ -2.43
USH2AO75445 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC-0.14□□□□□ -2.43
USH2AO75445 AC068790.6-201ENST00000602558 258 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC-0.14□□□□□ -2.43
USH2AO75445 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
USH2AO75445 MIR377-201ENST00000362145 69 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 MIR424-201ENST00000362227 98 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 SNORA12-201ENST00000391162 147 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.14□□□□□ -2.43
USH2AO75445 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC-0.14□□□□□ -2.43
USH2AO75445 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC-0.14□□□□□ -2.43
USH2AO75445 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.14□□□□□ -2.43
USH2AO75445 AL353778.1-201ENST00000603149 408 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 AC024940.5-201ENST00000622889 474 ntBASIC-0.14□□□□□ -2.43
USH2AO75445 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.14□□□□□ -2.43
USH2AO75445 RNU6-877P-201ENST00000383868 107 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 USP9YP19-201ENST00000412165 485 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 AC104651.1-201ENST00000427559 735 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC-0.15□□□□□ -2.43
USH2AO75445 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC-0.15□□□□□ -2.43
USH2AO75445 SNORA27.4-201ENST00000516650 95 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 AC002400.1-201ENST00000569310 726 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 AP003399.1-201ENST00000637534 361 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC-0.15□□□□□ -2.43
USH2AO75445 RNU6-950P-201ENST00000384651 107 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 RNU6-220P-201ENST00000390919 107 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 U3.29-201ENST00000391296 212 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 AC114482.1-201ENST00000418010 247 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 MTND2P19-201ENST00000449129 1012 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 RPL31P20-201ENST00000449593 360 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.15□□□□□ -2.43
USH2AO75445 AC022690.1-201ENST00000526681 550 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 AC093648.1-201ENST00000623546 606 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 SNORD114-14-201ENST00000362723 75 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 SNORA40.19-201ENST00000390846 128 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.15□□□□□ -2.43
USH2AO75445 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.15□□□□□ -2.43
USH2AO75445 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.15□□□□□ -2.43
USH2AO75445 MIR5591-201ENST00000578248 65 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 MTCYBP22-201ENST00000603788 447 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 uc_338.28-201ENST00000612082 187 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms