Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 VN1R80P-201ENST00000597126 338 ntBASIC1.16□□□□□ -2.22
SCN2BO60939 AC112220.3-201ENST00000605502 502 ntBASIC1.16□□□□□ -2.22
SCN2BO60939 AL157834.3-201ENST00000615543 103 ntBASIC1.16□□□□□ -2.22
SCN2BO60939 AL159153.1-201ENST00000619688 317 ntBASIC1.16□□□□□ -2.22
SCN2BO60939 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.16□□□□□ -2.22
SCN2BO60939 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
SCN2BO60939 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
SCN2BO60939 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
SCN2BO60939 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.15□□□□□ -2.22
SCN2BO60939 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.15□□□□□ -2.23
SCN2BO60939 MIR378A-201ENST00000362177 66 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 MIR302D-201ENST00000362275 68 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 RNU6-511P-201ENST00000363496 107 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 RPS3AP36-201ENST00000398190 775 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 ERHP2-201ENST00000402323 299 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 RPL37P10-201ENST00000412884 288 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.15□□□□□ -2.23
SCN2BO60939 AC092809.3-201ENST00000415453 231 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.15□□□□□ -2.23
SCN2BO60939 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.15□□□□□ -2.23
SCN2BO60939 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.15□□□□□ -2.23
SCN2BO60939 RPL26P26-201ENST00000480251 434 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 AC010587.2-201ENST00000511727 448 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.15□□□□□ -2.23
SCN2BO60939 AP004247.1-201ENST00000531556 1289 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.15□□□□□ -2.23
SCN2BO60939 AC012414.6-201ENST00000568241 401 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 AC023043.2-201ENST00000589678 1026 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 BCRP9-201ENST00000605312 388 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 AC144521.1-201ENST00000607148 956 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 AL355816.2-201ENST00000610049 647 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 uc_338.12-201ENST00000616344 181 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 AL356596.1-201ENST00000624230 379 ntBASIC1.15□□□□□ -2.23
SCN2BO60939 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.15□□□□□ -2.23
SCN2BO60939 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
SCN2BO60939 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SCN2BO60939 Y_RNA.192-201ENST00000363977 102 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 SNORD1A-201ENST00000364968 72 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 RNU6-360P-201ENST00000390944 104 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 BTF3L4P1-201ENST00000413813 468 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 RPL21P111-201ENST00000418453 477 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 BTF3P4-201ENST00000418852 495 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN2BO60939 RPL23AP30-201ENST00000432419 501 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 AC027119.1-201ENST00000440877 241 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.14□□□□□ -2.23
SCN2BO60939 AC130509.1-201ENST00000464158 433 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 AC112198.4-201ENST00000515450 351 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 RNA5SP490-201ENST00000517141 136 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 AC010376.1-201ENST00000522101 334 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN2BO60939 AC011979.2-201ENST00000527568 352 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 AC013828.2-201ENST00000532487 235 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 AL356057.1-201ENST00000533798 831 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SCN2BO60939 AC023050.2-201ENST00000544968 387 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN2BO60939 HMGB1P33-201ENST00000563485 527 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 AL136363.2-201ENST00000604173 851 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 AL359547.2-201ENST00000615810 418 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.14□□□□□ -2.23
SCN2BO60939 LINC02555-201ENST00000563933 1951 ntBASIC1.14□□□□□ -2.23
SCN2BO60939 SNORD56.1-201ENST00000362913 68 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 SNORA70.7-201ENST00000384159 133 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SCN2BO60939 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.13□□□□□ -2.23
SCN2BO60939 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.13□□□□□ -2.23
SCN2BO60939 MTND2P4-201ENST00000445034 1004 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 RNA5SP269-201ENST00000459032 137 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 SNORA43.2-201ENST00000516652 128 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.13□□□□□ -2.23
SCN2BO60939 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.13□□□□□ -2.23
SCN2BO60939 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.13□□□□□ -2.23
SCN2BO60939 AP003168.1-201ENST00000530091 307 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 AC092451.2-201ENST00000538746 658 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 MIR5094-201ENST00000578766 85 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 MIR3937-201ENST00000580135 106 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.13□□□□□ -2.23
SCN2BO60939 AC091135.1-201ENST00000585943 307 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 AC073413.2-201ENST00000604332 360 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 AL050343.2-201ENST00000607338 280 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 AC006386.1-201ENST00000619436 415 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 AL359757.2-201ENST00000624309 274 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 AC120349.3-201ENST00000624377 529 ntBASIC1.13□□□□□ -2.23
SCN2BO60939 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.13□□□□□ -2.23
SCN2BO60939 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SCN2BO60939 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SCN2BO60939 SNORD14B-201ENST00000364533 90 ntBASIC1.12□□□□□ -2.23
SCN2BO60939 RNU2-7P-201ENST00000410794 178 ntBASIC1.12□□□□□ -2.23
SCN2BO60939 MTND4P20-201ENST00000424125 869 ntBASIC1.12□□□□□ -2.23
SCN2BO60939 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN2BO60939 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN2BO60939 RPL9P9-202ENST00000466501 579 ntBASIC1.12□□□□□ -2.23
SCN2BO60939 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SCN2BO60939 Y_RNA.687-201ENST00000516558 91 ntBASIC1.12□□□□□ -2.23
SCN2BO60939 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN2BO60939 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN2BO60939 AL391001.1-201ENST00000602747 715 ntBASIC1.12□□□□□ -2.23
SCN2BO60939 AP000942.3-201ENST00000603702 160 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms