Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.62□□□□□ -1.99
CACNA1FO60840 snoU109.4-201ENST00000458953 143 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 Y_RNA.631-201ENST00000459607 101 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 HMGN2P26-201ENST00000463169 339 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 AC098591.2-201ENST00000510152 315 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 RPL39P5-202ENST00000512505 151 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.62□□□□□ -1.99
CACNA1FO60840 MIR5583-1-201ENST00000580941 59 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 MIR4424-201ENST00000585257 86 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 AL359547.2-201ENST00000615810 418 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 uc_338.34-201ENST00000617467 174 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 MIR7843-201ENST00000622274 79 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 MTND4P14-201ENST00000435799 1354 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 RNU6-38P-201ENST00000384085 107 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 RNU6-1077P-201ENST00000410506 102 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 Y_RNA.615-201ENST00000410769 117 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.61□□□□□ -1.99
CACNA1FO60840 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.61□□□□□ -1.99
CACNA1FO60840 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.61□□□□□ -1.99
CACNA1FO60840 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.61□□□□□ -1.99
CACNA1FO60840 RNU6-333P-201ENST00000459117 107 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 RNU6-1045P-201ENST00000516321 107 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 RNU6-1038P-201ENST00000516516 104 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 AP005639.2-201ENST00000527592 928 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 AP001330.4-201ENST00000604350 154 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.61□□□□□ -1.99
CACNA1FO60840 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.61□□□□□ -1.99
CACNA1FO60840 AC010680.1-201ENST00000590024 3590 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.61□□□□□ -1.99
CACNA1FO60840 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CACNA1FO60840 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CACNA1FO60840 FAM35CP-201ENST00000554755 2470 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 AC010733.2-201ENST00000589496 5702 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 ZNF720P1-201ENST00000562403 1939 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 RNU4-46P-201ENST00000410818 138 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 RNU6-1304P-201ENST00000411374 106 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 AC074085.1-201ENST00000413598 418 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.61□□□□□ -1.99
CACNA1FO60840 RNU7-152P-201ENST00000458982 64 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.61□□□□□ -1.99
CACNA1FO60840 RNU6-1095P-201ENST00000516148 108 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 RNU6-711P-201ENST00000517255 106 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.61□□□□□ -1.99
CACNA1FO60840 AL118558.2-201ENST00000556294 238 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.61□□□□□ -1.99
CACNA1FO60840 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.61□□□□□ -1.99
CACNA1FO60840 AL355802.3-201ENST00000607571 545 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 AC019193.3-201ENST00000609144 554 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 AC040168.1-201ENST00000623594 991 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.61□□□□□ -1.99
CACNA1FO60840 AL137003.2-201ENST00000606924 2538 ntBASIC2.61□□□□□ -1.99
CACNA1FO60840 SNORD42.2-201ENST00000365570 69 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 RNU4-20P-201ENST00000365601 151 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 RNU6-1013P-201ENST00000384180 107 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 RNU6-1160P-201ENST00000384546 104 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 SNORA75.4-201ENST00000391278 119 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 RNU2-43P-201ENST00000410306 190 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 AC104332.2-201ENST00000429959 156 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 AC024082.2-201ENST00000434771 238 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 NDUFA5P4-201ENST00000436704 385 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.6□□□□□ -1.99
CACNA1FO60840 Y_RNA.635-201ENST00000459041 101 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 AC027575.1-201ENST00000481064 460 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 MLLT10P2-201ENST00000506434 249 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.6□□□□□ -1.99
CACNA1FO60840 RNU6-1069P-201ENST00000516612 133 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.6□□□□□ -1.99
CACNA1FO60840 DEFB122-202ENST00000569013 197 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 MIR3942-201ENST00000585264 109 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 DPPA3P3-201ENST00000603842 430 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CACNA1FO60840 SNORD114-1-201ENST00000362705 72 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 Y_RNA.167-201ENST00000363735 109 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 RNA5SP139-201ENST00000364340 117 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 Y_RNA.315-201ENST00000365117 102 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 Y_RNA.414-201ENST00000384011 101 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 RNU6-14P-201ENST00000384630 106 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 RNA5SP56-201ENST00000410277 118 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 TOMM22P1-201ENST00000418578 312 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 MTCO2P27-201ENST00000420740 428 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 HMGN2P13-201ENST00000476476 274 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 RPS15AP36-201ENST00000492022 382 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 RNU6-1170P-201ENST00000515974 106 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.6□□□□□ -1.99
CACNA1FO60840 AC092747.3-201ENST00000603769 301 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 Y_RNA.812-201ENST00000610788 101 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 AL365204.3-201ENST00000612448 685 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 Y_RNA.784-201ENST00000613803 101 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 AC133104.2-201ENST00000615272 193 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 Y_RNA.787-201ENST00000616522 101 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 Y_RNA.780-201ENST00000617336 101 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 Y_RNA.801-201ENST00000619005 101 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 MIR4275-201ENST00000636486 87 ntBASIC2.6□□□□□ -1.99
CACNA1FO60840 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.59□□□□□ -1.99
CACNA1FO60840 AC103710.2-202ENST00000641454 2853 ntBASIC2.59□□□□□ -1.99
CACNA1FO60840 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CACNA1FO60840 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.59□□□□□ -1.99
CACNA1FO60840 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms