Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PROM1O43490 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.31□□□□□ -1.88
PROM1O43490 AC092435.3-201ENST00000565538 3654 ntBASIC3.31□□□□□ -1.88
PROM1O43490 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PROM1O43490 ZNF72P-201ENST00000425869 1908 ntBASIC3.31□□□□□ -1.88
PROM1O43490 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.3□□□□□ -1.88
PROM1O43490 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.3□□□□□ -1.88
PROM1O43490 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PROM1O43490 Y_RNA.153-201ENST00000363615 91 ntBASIC3.3□□□□□ -1.88
PROM1O43490 RNY3P11-201ENST00000364153 102 ntBASIC3.3□□□□□ -1.88
PROM1O43490 Y_RNA.577-201ENST00000384794 101 ntBASIC3.3□□□□□ -1.88
PROM1O43490 RN7SKP111-201ENST00000410349 271 ntBASIC3.3□□□□□ -1.88
PROM1O43490 RNU6-1156P-201ENST00000410365 100 ntBASIC3.3□□□□□ -1.88
PROM1O43490 NUP35P1-201ENST00000422734 947 ntBASIC3.3□□□□□ -1.88
PROM1O43490 AC098614.2-201ENST00000426040 255 ntBASIC3.3□□□□□ -1.88
PROM1O43490 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.3□□□□□ -1.88
PROM1O43490 AL357552.1-201ENST00000445254 415 ntBASIC3.3□□□□□ -1.88
PROM1O43490 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.3□□□□□ -1.88
PROM1O43490 RNU7-169P-201ENST00000459456 61 ntBASIC3.3□□□□□ -1.88
PROM1O43490 RPS27P29-201ENST00000463110 252 ntBASIC3.3□□□□□ -1.88
PROM1O43490 AP002884.2-201ENST00000471647 395 ntBASIC3.3□□□□□ -1.88
PROM1O43490 AC114801.2-201ENST00000503825 781 ntBASIC3.3□□□□□ -1.88
PROM1O43490 AC110794.1-201ENST00000505816 425 ntBASIC3.3□□□□□ -1.88
PROM1O43490 AC004817.2-201ENST00000561794 651 ntBASIC3.3□□□□□ -1.88
PROM1O43490 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.3□□□□□ -1.88
PROM1O43490 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.3□□□□□ -1.88
PROM1O43490 AC124312.5-201ENST00000604451 268 ntBASIC3.3□□□□□ -1.88
PROM1O43490 AC027309.3-201ENST00000623419 351 ntBASIC3.3□□□□□ -1.88
PROM1O43490 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PROM1O43490 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PROM1O43490 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.29□□□□□ -1.88
PROM1O43490 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PROM1O43490 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PROM1O43490 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
PROM1O43490 RNU6-428P-201ENST00000362942 107 ntBASIC3.29□□□□□ -1.88
PROM1O43490 RNA5SP267-201ENST00000364893 126 ntBASIC3.29□□□□□ -1.88
PROM1O43490 RNU5E-7P-201ENST00000365290 117 ntBASIC3.29□□□□□ -1.88
PROM1O43490 AP002088.1-201ENST00000382740 395 ntBASIC3.29□□□□□ -1.88
PROM1O43490 RNU6-823P-201ENST00000391042 103 ntBASIC3.29□□□□□ -1.88
PROM1O43490 AL591034.2-201ENST00000402839 359 ntBASIC3.29□□□□□ -1.88
PROM1O43490 RNA5SP293-201ENST00000410527 113 ntBASIC3.29□□□□□ -1.88
PROM1O43490 AL117339.3-201ENST00000418733 162 ntBASIC3.29□□□□□ -1.88
PROM1O43490 MTND3P9-201ENST00000429526 346 ntBASIC3.29□□□□□ -1.88
PROM1O43490 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.29□□□□□ -1.88
PROM1O43490 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.29□□□□□ -1.88
PROM1O43490 OR2AQ1P-201ENST00000451972 200 ntBASIC3.29□□□□□ -1.88
PROM1O43490 RBMY2UP-201ENST00000453474 324 ntBASIC3.29□□□□□ -1.88
PROM1O43490 BX510359.1-201ENST00000456973 237 ntBASIC3.29□□□□□ -1.88
PROM1O43490 RN7SL442P-201ENST00000473804 320 ntBASIC3.29□□□□□ -1.88
PROM1O43490 RPS29P2-201ENST00000479278 136 ntBASIC3.29□□□□□ -1.88
PROM1O43490 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.29□□□□□ -1.88
PROM1O43490 RNU6-377P-201ENST00000515965 102 ntBASIC3.29□□□□□ -1.88
PROM1O43490 RNU6-475P-201ENST00000516073 104 ntBASIC3.29□□□□□ -1.88
PROM1O43490 AC109479.2-201ENST00000517842 174 ntBASIC3.29□□□□□ -1.88
PROM1O43490 AP005902.1-201ENST00000521358 186 ntBASIC3.29□□□□□ -1.88
PROM1O43490 AL161670.1-201ENST00000554348 137 ntBASIC3.29□□□□□ -1.88
PROM1O43490 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.29□□□□□ -1.88
PROM1O43490 MIR4782-201ENST00000577987 79 ntBASIC3.29□□□□□ -1.88
PROM1O43490 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.29□□□□□ -1.88
PROM1O43490 MIR3609-201ENST00000582661 80 ntBASIC3.29□□□□□ -1.88
PROM1O43490 AL158827.2-201ENST00000602494 330 ntBASIC3.29□□□□□ -1.88
PROM1O43490 HSPE1P7-201ENST00000604681 321 ntBASIC3.29□□□□□ -1.88
PROM1O43490 AC099778.2-201ENST00000610904 211 ntBASIC3.29□□□□□ -1.88
PROM1O43490 MIR1244-1-201ENST00000612829 85 ntBASIC3.29□□□□□ -1.88
PROM1O43490 U4.1-201ENST00000620349 87 ntBASIC3.29□□□□□ -1.88
PROM1O43490 MIR3651-201ENST00000630427 90 ntBASIC3.29□□□□□ -1.88
PROM1O43490 AL691447.3-201ENST00000635020 330 ntBASIC3.29□□□□□ -1.88
PROM1O43490 MIR1244-3-201ENST00000635744 85 ntBASIC3.29□□□□□ -1.88
PROM1O43490 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.29□□□□□ -1.88
PROM1O43490 MIR1244-2-201ENST00000636449 85 ntBASIC3.29□□□□□ -1.88
PROM1O43490 MIR1244-4-202ENST00000636813 85 ntBASIC3.29□□□□□ -1.88
PROM1O43490 AC091564.4-201ENST00000533934 2194 ntBASIC3.29□□□□□ -1.88
PROM1O43490 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PROM1O43490 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PROM1O43490 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PROM1O43490 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.28□□□□□ -1.88
PROM1O43490 AL513302.2-201ENST00000562313 1842 ntBASIC3.28□□□□□ -1.88
PROM1O43490 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.28□□□□□ -1.88
PROM1O43490 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.28□□□□□ -1.88
PROM1O43490 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
PROM1O43490 RNU6-799P-201ENST00000363567 107 ntBASIC3.28□□□□□ -1.88
PROM1O43490 SET-203ENST00000372688 801 ntTSL 2 BASIC3.28□□□□□ -1.88
PROM1O43490 Y_RNA.574-201ENST00000384766 95 ntBASIC3.28□□□□□ -1.88
PROM1O43490 MIR625-201ENST00000385047 85 ntBASIC3.28□□□□□ -1.88
PROM1O43490 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.28□□□□□ -1.88
PROM1O43490 AC092423.1-201ENST00000430165 186 ntBASIC3.28□□□□□ -1.88
PROM1O43490 BX679664.1-201ENST00000434429 253 ntBASIC3.28□□□□□ -1.88
PROM1O43490 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.28□□□□□ -1.88
PROM1O43490 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.28□□□□□ -1.88
PROM1O43490 U8.20-201ENST00000459445 131 ntBASIC3.28□□□□□ -1.88
PROM1O43490 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.28□□□□□ -1.88
PROM1O43490 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.28□□□□□ -1.88
PROM1O43490 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.28□□□□□ -1.88
PROM1O43490 SNORA70.19-201ENST00000516717 90 ntBASIC3.28□□□□□ -1.88
PROM1O43490 RNU7-4P-201ENST00000516961 62 ntBASIC3.28□□□□□ -1.88
PROM1O43490 RN7SKP57-201ENST00000517248 293 ntBASIC3.28□□□□□ -1.88
PROM1O43490 AC004584.2-201ENST00000570407 410 ntBASIC3.28□□□□□ -1.88
PROM1O43490 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.28□□□□□ -1.88
PROM1O43490 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
PROM1O43490 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms