Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SRGAP3O43295 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.02□□□□□ -1.77
SRGAP3O43295 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SRGAP3O43295 Y_RNA.183-201ENST00000363882 113 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 RNU6-200P-201ENST00000364743 107 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 RNU6-611P-201ENST00000384276 104 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 MIR10A-201ENST00000385043 110 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SRGAP3O43295 RNU6-121P-201ENST00000410525 99 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 RNU6-130P-201ENST00000411112 103 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 RPL23AP45-201ENST00000476406 468 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 AC098869.1-201ENST00000481627 292 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 RN7SL504P-201ENST00000494496 287 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 PHBP14-201ENST00000512887 367 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 SNORA70.14-201ENST00000516205 110 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 RNU6-1256P-201ENST00000516539 103 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 SNORA31.20-201ENST00000517111 133 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 AP004371.1-201ENST00000525240 214 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.01□□□□□ -1.77
SRGAP3O43295 MIR3186-201ENST00000577404 85 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 MIR5696-201ENST00000578474 85 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 YPEL5P2-201ENST00000605553 359 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.01□□□□□ -1.77
SRGAP3O43295 MIR7153-201ENST00000637758 57 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
SRGAP3O43295 Z75746.1-201ENST00000440243 2080 ntBASIC4.01□□□□□ -1.77
SRGAP3O43295 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SRGAP3O43295 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.01□□□□□ -1.77
SRGAP3O43295 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SRGAP3O43295 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
SRGAP3O43295 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4□□□□□ -1.77
SRGAP3O43295 AP000560.1-201ENST00000624150 1937 ntBASIC4□□□□□ -1.77
SRGAP3O43295 Y_RNA.333-201ENST00000365274 102 ntBASIC4□□□□□ -1.77
SRGAP3O43295 RNU6-629P-201ENST00000384061 103 ntBASIC4□□□□□ -1.77
SRGAP3O43295 MIR548H3-201ENST00000408771 118 ntBASIC4□□□□□ -1.77
SRGAP3O43295 RNU2-25P-201ENST00000411041 191 ntBASIC4□□□□□ -1.77
SRGAP3O43295 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4□□□□□ -1.77
SRGAP3O43295 AC139712.2-201ENST00000424302 339 ntBASIC4□□□□□ -1.77
SRGAP3O43295 AC007919.1-201ENST00000429380 217 ntBASIC4□□□□□ -1.77
SRGAP3O43295 MYL8P-204ENST00000431574 518 ntBASIC4□□□□□ -1.77
SRGAP3O43295 MTCO3P29-201ENST00000432119 779 ntBASIC4□□□□□ -1.77
SRGAP3O43295 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4□□□□□ -1.77
SRGAP3O43295 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4□□□□□ -1.77
SRGAP3O43295 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4□□□□□ -1.77
SRGAP3O43295 AC006539.3-201ENST00000454258 129 ntBASIC4□□□□□ -1.77
SRGAP3O43295 DCLRE1CP1-201ENST00000454630 470 ntBASIC4□□□□□ -1.77
SRGAP3O43295 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4□□□□□ -1.77
SRGAP3O43295 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4□□□□□ -1.77
SRGAP3O43295 RRN3P3-201ENST00000549207 578 ntBASIC4□□□□□ -1.77
SRGAP3O43295 AL161629.2-201ENST00000615347 275 ntBASIC4□□□□□ -1.77
SRGAP3O43295 AC092628.2-201ENST00000622492 339 ntBASIC4□□□□□ -1.77
SRGAP3O43295 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4□□□□□ -1.77
SRGAP3O43295 AP001148.1-201ENST00000624124 2359 ntBASIC4□□□□□ -1.77
SRGAP3O43295 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SRGAP3O43295 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SRGAP3O43295 AL139811.1-201ENST00000424779 2299 ntBASIC4□□□□□ -1.77
SRGAP3O43295 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.99□□□□□ -1.77
SRGAP3O43295 DEFB108F-201ENST00000344638 222 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 Y_RNA.245-201ENST00000364493 95 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 Y_RNA.416-201ENST00000384014 113 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 Y_RNA.518-201ENST00000384552 113 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 RNU2-33P-201ENST00000410344 192 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 Y_RNA.623-201ENST00000411128 95 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 RNA5SP31-201ENST00000411144 127 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 AL117339.3-201ENST00000418733 162 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 RPS12P23-201ENST00000419579 400 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.99□□□□□ -1.77
SRGAP3O43295 AL590135.1-201ENST00000422215 156 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 PIGPP3-201ENST00000425307 415 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 AL353705.1-201ENST00000433468 480 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 AC006028.1-201ENST00000438379 402 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
SRGAP3O43295 AL139109.1-201ENST00000455491 297 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 HMGN1P18-201ENST00000457642 277 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 RNU6-612P-201ENST00000516909 102 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 RNA5SP290-201ENST00000517133 127 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.99□□□□□ -1.77
SRGAP3O43295 AL590705.4-201ENST00000532209 134 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 AC008962.1-201ENST00000605729 304 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 AC009318.2-201ENST00000610917 651 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 MIR3651-201ENST00000630427 90 ntBASIC3.99□□□□□ -1.77
SRGAP3O43295 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.99□□□□□ -1.77
SRGAP3O43295 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SRGAP3O43295 AC073346.2-201ENST00000624724 2058 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SRGAP3O43295 SNORD50.1-201ENST00000362987 71 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 Y_RNA.84-201ENST00000363011 104 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 U3.6-201ENST00000363622 211 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 RNU4-47P-201ENST00000410876 114 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 AC096920.1-201ENST00000423991 241 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.98□□□□□ -1.77
SRGAP3O43295 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SRGAP3O43295 FABP5P15-201ENST00000453566 214 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 RNU7-87P-201ENST00000459343 62 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 RN7SL863P-201ENST00000462370 296 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 AC109925.1-201ENST00000478069 331 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 RPL30P10-201ENST00000488148 337 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.98□□□□□ -1.77
SRGAP3O43295 RNU6-182P-201ENST00000516970 105 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 RN7SKP40-201ENST00000517211 242 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms