Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC073539.2-201ENST00000597113 165 ntBASIC1.97□□□□□ -2.09
MSH4O15457 Z84480.1-201ENST00000605131 311 ntBASIC1.97□□□□□ -2.09
MSH4O15457 NDUFA8P1-201ENST00000605525 367 ntBASIC1.97□□□□□ -2.09
MSH4O15457 AL161423.1-201ENST00000613700 262 ntBASIC1.97□□□□□ -2.09
MSH4O15457 AC026585.1-201ENST00000619582 524 ntBASIC1.97□□□□□ -2.09
MSH4O15457 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
MSH4O15457 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.96□□□□□ -2.1
MSH4O15457 RNU6-1097P-201ENST00000363586 107 ntBASIC1.96□□□□□ -2.1
MSH4O15457 RNU6-108P-201ENST00000365558 107 ntBASIC1.96□□□□□ -2.1
MSH4O15457 MIR1-2-201ENST00000384961 85 ntBASIC1.96□□□□□ -2.1
MSH4O15457 MIR95-201ENST00000385072 81 ntBASIC1.96□□□□□ -2.1
MSH4O15457 RNU6-550P-201ENST00000391057 101 ntBASIC1.96□□□□□ -2.1
MSH4O15457 U3.40-201ENST00000408706 208 ntBASIC1.96□□□□□ -2.1
MSH4O15457 RNA5SP270-201ENST00000411361 118 ntBASIC1.96□□□□□ -2.1
MSH4O15457 AIMP1P2-201ENST00000425294 312 ntBASIC1.96□□□□□ -2.1
MSH4O15457 MTND3P25-201ENST00000509243 135 ntBASIC1.96□□□□□ -2.1
MSH4O15457 RNU2-53P-201ENST00000516257 147 ntBASIC1.96□□□□□ -2.1
MSH4O15457 SNORA43.2-201ENST00000516652 128 ntBASIC1.96□□□□□ -2.1
MSH4O15457 SNORA31.23-201ENST00000517219 133 ntBASIC1.96□□□□□ -2.1
MSH4O15457 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.96□□□□□ -2.1
MSH4O15457 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.96□□□□□ -2.1
MSH4O15457 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.96□□□□□ -2.1
MSH4O15457 BNIP3P6-201ENST00000549284 499 ntBASIC1.96□□□□□ -2.1
MSH4O15457 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.96□□□□□ -2.1
MSH4O15457 OR11H5P-201ENST00000554039 926 ntBASIC1.96□□□□□ -2.1
MSH4O15457 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.96□□□□□ -2.1
MSH4O15457 AC025165.5-201ENST00000602802 578 ntBASIC1.96□□□□□ -2.1
MSH4O15457 uc_338.15-201ENST00000615470 191 ntBASIC1.96□□□□□ -2.1
MSH4O15457 AC009090.3-201ENST00000616553 565 ntBASIC1.96□□□□□ -2.1
MSH4O15457 AC008147.4-201ENST00000617570 1204 ntBASIC1.96□□□□□ -2.1
MSH4O15457 AC008121.3-201ENST00000618726 433 ntBASIC1.96□□□□□ -2.1
MSH4O15457 AC011155.2-201ENST00000623202 216 ntBASIC1.96□□□□□ -2.1
MSH4O15457 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
MSH4O15457 RNU6-622P-201ENST00000384272 103 ntBASIC1.95□□□□□ -2.1
MSH4O15457 MIR454-201ENST00000390180 115 ntBASIC1.95□□□□□ -2.1
MSH4O15457 RAP1BP3-201ENST00000407180 549 ntBASIC1.95□□□□□ -2.1
MSH4O15457 SNORD23.1-201ENST00000408212 104 ntBASIC1.95□□□□□ -2.1
MSH4O15457 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.95□□□□□ -2.1
MSH4O15457 RNU2-40P-201ENST00000410833 196 ntBASIC1.95□□□□□ -2.1
MSH4O15457 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.95□□□□□ -2.1
MSH4O15457 AC244505.5-201ENST00000443639 207 ntBASIC1.95□□□□□ -2.1
MSH4O15457 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.95□□□□□ -2.1
MSH4O15457 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.95□□□□□ -2.1
MSH4O15457 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.95□□□□□ -2.1
MSH4O15457 MTND1P27-201ENST00000451117 902 ntBASIC1.95□□□□□ -2.1
MSH4O15457 RPS27AP8-201ENST00000452665 445 ntBASIC1.95□□□□□ -2.1
MSH4O15457 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.95□□□□□ -2.1
MSH4O15457 AL162395.1-201ENST00000457882 422 ntBASIC1.95□□□□□ -2.1
MSH4O15457 BET1P1-201ENST00000482276 359 ntBASIC1.95□□□□□ -2.1
MSH4O15457 AP001025.1-201ENST00000486139 332 ntBASIC1.95□□□□□ -2.1
MSH4O15457 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.95□□□□□ -2.1
MSH4O15457 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.95□□□□□ -2.1
MSH4O15457 MTCO3P28-201ENST00000513351 515 ntBASIC1.95□□□□□ -2.1
MSH4O15457 RNU6-991P-201ENST00000516168 107 ntBASIC1.95□□□□□ -2.1
MSH4O15457 SNORD27.1-201ENST00000516319 72 ntBASIC1.95□□□□□ -2.1
MSH4O15457 SNORA48.11-201ENST00000517015 89 ntBASIC1.95□□□□□ -2.1
MSH4O15457 AC109329.1-201ENST00000518744 317 ntBASIC1.95□□□□□ -2.1
MSH4O15457 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.95□□□□□ -2.1
MSH4O15457 AC093249.1-201ENST00000567049 203 ntBASIC1.95□□□□□ -2.1
MSH4O15457 MIR3126-201ENST00000577443 74 ntBASIC1.95□□□□□ -2.1
MSH4O15457 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.95□□□□□ -2.1
MSH4O15457 AC006566.1-201ENST00000608943 513 ntBASIC1.95□□□□□ -2.1
MSH4O15457 AC091834.1-201ENST00000614543 472 ntBASIC1.95□□□□□ -2.1
MSH4O15457 RMST_4.1-201ENST00000616886 107 ntBASIC1.95□□□□□ -2.1
MSH4O15457 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.95□□□□□ -2.1
MSH4O15457 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
MSH4O15457 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
MSH4O15457 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MSH4O15457 RNU6-1159P-201ENST00000362933 107 ntBASIC1.94□□□□□ -2.1
MSH4O15457 SNORD48-201ENST00000364953 64 ntBASIC1.94□□□□□ -2.1
MSH4O15457 RNU6-282P-201ENST00000365357 103 ntBASIC1.94□□□□□ -2.1
MSH4O15457 AL591034.2-201ENST00000402839 359 ntBASIC1.94□□□□□ -2.1
MSH4O15457 RN7SKP142-201ENST00000411236 328 ntBASIC1.94□□□□□ -2.1
MSH4O15457 AC133104.1-201ENST00000429100 218 ntBASIC1.94□□□□□ -2.1
MSH4O15457 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.94□□□□□ -2.1
MSH4O15457 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.94□□□□□ -2.1
MSH4O15457 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.94□□□□□ -2.1
MSH4O15457 MTND2P4-201ENST00000445034 1004 ntBASIC1.94□□□□□ -2.1
MSH4O15457 RNU7-182P-201ENST00000459009 62 ntBASIC1.94□□□□□ -2.1
MSH4O15457 MTCO2P6-201ENST00000463134 685 ntBASIC1.94□□□□□ -2.1
MSH4O15457 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.94□□□□□ -2.1
MSH4O15457 RNA5SP503-201ENST00000517047 117 ntBASIC1.94□□□□□ -2.1
MSH4O15457 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.94□□□□□ -2.1
MSH4O15457 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.94□□□□□ -2.1
MSH4O15457 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.94□□□□□ -2.1
MSH4O15457 MIR3683-201ENST00000580847 82 ntBASIC1.94□□□□□ -2.1
MSH4O15457 MIR4775-201ENST00000581168 75 ntBASIC1.94□□□□□ -2.1
MSH4O15457 APOOP1-201ENST00000604695 592 ntBASIC1.94□□□□□ -2.1
MSH4O15457 AC121247.2-201ENST00000604776 136 ntBASIC1.94□□□□□ -2.1
MSH4O15457 AC098614.4-201ENST00000607601 462 ntBASIC1.94□□□□□ -2.1
MSH4O15457 AC073114.1-201ENST00000612027 490 ntBASIC1.94□□□□□ -2.1
MSH4O15457 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.94□□□□□ -2.1
MSH4O15457 AP001486.3-201ENST00000615334 372 ntBASIC1.94□□□□□ -2.1
MSH4O15457 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
MSH4O15457 SEPT14P19-203ENST00000633205 211 ntBASIC1.94□□□□□ -2.1
MSH4O15457 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MSH4O15457 SNORD56.1-201ENST00000362913 68 ntBASIC1.93□□□□□ -2.1
MSH4O15457 RNU1-23P-201ENST00000363361 144 ntBASIC1.93□□□□□ -2.1
MSH4O15457 RNU6-529P-201ENST00000363383 104 ntBASIC1.93□□□□□ -2.1
MSH4O15457 RNU6-45P-201ENST00000384471 107 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms