Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 CYCSP27-201ENST00000527643 293 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CACNA1AO00555 AC004217.3-201ENST00000551552 878 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 CYP3A52P-201ENST00000563326 91 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 AC022254.1-201ENST00000567857 235 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 FTX_3.1-201ENST00000610451 147 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 MIR8064-201ENST00000612863 90 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 AC091965.5-201ENST00000624785 342 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 Z99571.1-201ENST00000636677 394 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 RNU6-26P-201ENST00000383985 107 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 RNU6-878P-201ENST00000384578 110 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 Y_RNA.562-201ENST00000384695 113 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 RPL37P10-201ENST00000412884 288 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 BTF3P8-201ENST00000414577 526 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 USP9YP26-201ENST00000421008 661 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.17□□□□□ -2.38
CACNA1AO00555 RNFT1P2-201ENST00000443064 757 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 USP9YP17-201ENST00000444617 696 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 MRPL42P4-201ENST00000453267 443 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 HMGN3P1-201ENST00000453847 193 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CACNA1AO00555 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.17□□□□□ -2.38
CACNA1AO00555 AC145146.1-201ENST00000496370 254 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 RNU6-1282P-201ENST00000516735 96 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.17□□□□□ -2.38
CACNA1AO00555 HSPA8P13-201ENST00000523715 472 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.17□□□□□ -2.38
CACNA1AO00555 AC091489.2-201ENST00000566263 604 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 MIR3678-201ENST00000578455 94 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 AL022067.1-201ENST00000602426 454 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.17□□□□□ -2.38
CACNA1AO00555 AL031176.1-201ENST00000604554 466 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 AL590240.4-201ENST00000616908 390 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 AL109620.1-201ENST00000618738 1197 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.17□□□□□ -2.38
CACNA1AO00555 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
CACNA1AO00555 RNU5A-1-201ENST00000362698 116 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 MIR421-201ENST00000365696 85 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.16□□□□□ -2.38
CACNA1AO00555 RNU6-968P-201ENST00000384076 107 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 SNORA25-201ENST00000384384 134 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
CACNA1AO00555 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.16□□□□□ -2.38
CACNA1AO00555 MTND1P16-201ENST00000465177 898 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 AC015724.1-201ENST00000478577 156 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.16□□□□□ -2.38
CACNA1AO00555 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.16□□□□□ -2.38
CACNA1AO00555 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.16□□□□□ -2.38
CACNA1AO00555 SCARNA15.2-201ENST00000516409 127 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 RNU6-1256P-201ENST00000516539 103 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 AC005832.3-201ENST00000537929 631 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 MIR4661-201ENST00000582720 75 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 AC021171.1-201ENST00000603137 706 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.16□□□□□ -2.38
CACNA1AO00555 AC242628.1-201ENST00000606810 391 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.16□□□□□ -2.38
CACNA1AO00555 AL132822.1-201ENST00000617063 513 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.16□□□□□ -2.38
CACNA1AO00555 SNORD18A-201ENST00000363753 72 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 MIR135A2-201ENST00000384854 100 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 MIR514A1-201ENST00000385133 98 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 HMGN2P39-201ENST00000398005 273 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 AC069282.1-201ENST00000411911 526 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.16□□□□□ -2.38
CACNA1AO00555 AL592447.1-201ENST00000447592 540 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.16□□□□□ -2.38
CACNA1AO00555 AC013267.1-201ENST00000458227 267 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 AC112771.1-201ENST00000463581 102 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 RPL21P47-201ENST00000483696 477 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 AC091959.1-201ENST00000495857 238 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 HIGD1AP6-201ENST00000521833 279 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.16□□□□□ -2.38
CACNA1AO00555 DEFB108D-201ENST00000527787 222 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.16□□□□□ -2.38
CACNA1AO00555 AL391597.1-201ENST00000618707 694 ntBASIC0.16□□□□□ -2.38
CACNA1AO00555 FARSBP1-201ENST00000435808 1778 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 Y_RNA.231-201ENST00000364358 102 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
CACNA1AO00555 RNA5SP501-201ENST00000410990 112 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 RPS15AP10-201ENST00000432472 382 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 AC098831.1-201ENST00000440661 216 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.15□□□□□ -2.39
CACNA1AO00555 MTCO3P2-201ENST00000457365 171 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 RPF2P2-201ENST00000504693 896 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 RNU6-1191P-201ENST00000516799 107 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.15□□□□□ -2.39
CACNA1AO00555 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.15□□□□□ -2.39
CACNA1AO00555 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
CACNA1AO00555 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.15□□□□□ -2.39
CACNA1AO00555 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.15□□□□□ -2.39
CACNA1AO00555 AC079598.5-201ENST00000547460 117 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 MIR4713-201ENST00000582691 75 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.15□□□□□ -2.39
CACNA1AO00555 AC073544.2-201ENST00000601155 540 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 BBIP1P1-201ENST00000602999 279 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 AL713866.2-201ENST00000603579 219 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 MTCYBP22-201ENST00000603788 447 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 AC069304.2-201ENST00000605154 435 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 AP001596.2-201ENST00000608410 312 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms