Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC188H7C350 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC188H7C350 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC188H7C350 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC188H7C350 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC188H7C350 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC188H7C350 AC008526.1-201ENST00000509149 338 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC188H7C350 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC188H7C350 AC109479.2-201ENST00000517842 174 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC188H7C350 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC188H7C350 MIR3941-201ENST00000582572 103 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 MIR5007-201ENST00000583098 95 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 AC007621.1-201ENST00000604544 437 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 AP001596.2-201ENST00000608410 312 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
CCDC188H7C350 RMST_7.1-201ENST00000621935 268 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC188H7C350 AC002543.1-201ENST00000299783 1954 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC188H7C350 RNU6-1210P-201ENST00000363775 107 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 RNU4-24P-201ENST00000364565 139 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 RNA5SP37-201ENST00000365420 130 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 Y_RNA.517-201ENST00000384551 106 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 MIR544A-201ENST00000384855 91 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 MTCO3P40-201ENST00000392516 676 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 BTF3P7-201ENST00000407097 488 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC188H7C350 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC188H7C350 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC188H7C350 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC188H7C350 AC016691.1-201ENST00000441321 413 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 AC009238.1-201ENST00000442165 424 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 MTCO2P7-201ENST00000446518 666 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 AC009237.6-201ENST00000446969 424 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 AL031659.1-201ENST00000447075 539 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC188H7C350 RNU7-167P-201ENST00000459160 62 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 RNU6-261P-201ENST00000459506 102 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC188H7C350 AP001025.1-201ENST00000486139 332 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 RPL9P6-201ENST00000492764 598 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC188H7C350 RNU4-29P-201ENST00000515943 174 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 SNORA40.12-201ENST00000516329 111 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 RNU6-586P-201ENST00000517265 104 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 AC022880.1-201ENST00000534017 973 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC188H7C350 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.39□□□□□ -2.03
CCDC188H7C350 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC188H7C350 AC104984.5-201ENST00000586878 94 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 AL713866.2-201ENST00000603579 219 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 AC123912.5-201ENST00000605470 343 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 AC009233.1-201ENST00000616477 371 ntBASIC2.39□□□□□ -2.03
CCDC188H7C350 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC188H7C350 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC188H7C350 Z82209.1-201ENST00000422141 2135 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC188H7C350 MIR449A-201ENST00000362113 91 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 RNU4-66P-201ENST00000365199 138 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 RNU6-1106P-201ENST00000390845 107 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 AL445529.1-201ENST00000398713 389 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 AL590556.1-201ENST00000423231 483 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 AC008267.5-201ENST00000424928 265 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC188H7C350 AC063976.3-201ENST00000426849 329 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 VN1R108P-201ENST00000431580 830 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 RPS15AP28-201ENST00000435088 386 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC188H7C350 RPL39P29-201ENST00000447779 157 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 FDX1P2-201ENST00000450769 375 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 RNU7-180P-201ENST00000459240 63 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC188H7C350 MTND2P33-201ENST00000506452 1031 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 AK3P2-201ENST00000507976 429 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 RNU1-104P-201ENST00000517280 175 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 AC109329.1-201ENST00000518744 317 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC188H7C350 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC188H7C350 MIR3126-201ENST00000577443 74 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 AC012557.2-201ENST00000605919 418 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 AC013412.1-201ENST00000610687 192 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 U4atac.1-201ENST00000618345 95 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC188H7C350 AC124864.2-201ENST00000624736 186 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 U4.7-201ENST00000638126 106 ntBASIC2.38□□□□□ -2.03
CCDC188H7C350 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
CCDC188H7C350 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CCDC188H7C350 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC188H7C350 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CCDC188H7C350 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC188H7C350 RNU6-105P-201ENST00000363909 104 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 RNU4-75P-201ENST00000364621 146 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 SNORA67.1-201ENST00000364749 141 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 RNU1-52P-201ENST00000384190 164 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 MIR144-201ENST00000384886 86 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 AC007064.1-201ENST00000412238 351 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms