Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AC069200.1-201ENST00000609511 323 ntBASIC4.33□□□□□ -1.72
RNF223E7ERA6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RNF223E7ERA6 AL591926.8-201ENST00000616876 211 ntBASIC4.33□□□□□ -1.72
RNF223E7ERA6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF223E7ERA6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
RNF223E7ERA6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF223E7ERA6 MAPK10-263ENST00000641052 4307 ntBASIC4.33□□□□□ -1.72
RNF223E7ERA6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF223E7ERA6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF223E7ERA6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF223E7ERA6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF223E7ERA6 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RNF223E7ERA6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF223E7ERA6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF223E7ERA6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
RNF223E7ERA6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RNF223E7ERA6 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF223E7ERA6 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF223E7ERA6 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
RNF223E7ERA6 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF223E7ERA6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF223E7ERA6 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF223E7ERA6 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
RNF223E7ERA6 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF223E7ERA6 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
RNF223E7ERA6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RNF223E7ERA6 AC016588.2-201ENST00000632484 3021 ntBASIC4.32□□□□□ -1.72
RNF223E7ERA6 RNA5SP505-201ENST00000364748 108 ntBASIC4.32□□□□□ -1.72
RNF223E7ERA6 Y_RNA.313-201ENST00000365095 103 ntBASIC4.32□□□□□ -1.72
RNF223E7ERA6 RNU6-1240P-201ENST00000365155 104 ntBASIC4.32□□□□□ -1.72
RNF223E7ERA6 SNORA62-201ENST00000365493 153 ntBASIC4.32□□□□□ -1.72
RNF223E7ERA6 RNU6-979P-201ENST00000383896 107 ntBASIC4.32□□□□□ -1.72
RNF223E7ERA6 RNU6-748P-201ENST00000384648 107 ntBASIC4.32□□□□□ -1.72
RNF223E7ERA6 RBMY2UP-201ENST00000453474 324 ntBASIC4.32□□□□□ -1.72
RNF223E7ERA6 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF223E7ERA6 RN7SL385P-201ENST00000468873 276 ntBASIC4.32□□□□□ -1.72
RNF223E7ERA6 COX6B1P5-201ENST00000509843 249 ntBASIC4.32□□□□□ -1.72
RNF223E7ERA6 RN7SKP209-201ENST00000516888 304 ntBASIC4.32□□□□□ -1.72
RNF223E7ERA6 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.32□□□□□ -1.72
RNF223E7ERA6 HSPE1P5-201ENST00000561489 272 ntBASIC4.32□□□□□ -1.72
RNF223E7ERA6 AC209154.1-201ENST00000582156 337 ntBASIC4.32□□□□□ -1.72
RNF223E7ERA6 MIR4737-201ENST00000583979 81 ntBASIC4.32□□□□□ -1.72
RNF223E7ERA6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF223E7ERA6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF223E7ERA6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF223E7ERA6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF223E7ERA6 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
RNF223E7ERA6 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF223E7ERA6 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF223E7ERA6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF223E7ERA6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF223E7ERA6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF223E7ERA6 RNA5SP90-201ENST00000364801 99 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 RNA5SP428-201ENST00000365129 132 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 SNORD61-201ENST00000384252 73 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 RN7SKP267-201ENST00000410381 285 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 YME1L1P1-201ENST00000429435 297 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 RPL34P20-201ENST00000442771 351 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 AC073264.2-201ENST00000448886 166 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF223E7ERA6 RNA5SP57-201ENST00000459463 123 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 SNORD125-201ENST00000459538 96 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 RNU6-221P-201ENST00000459541 99 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 RN7SL807P-201ENST00000470923 297 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 SNRPCP3-201ENST00000474888 476 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 AC097462.1-201ENST00000514125 324 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 RNU6-1073P-201ENST00000517182 106 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 AC106785.1-201ENST00000565935 262 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 RPL23AP97-201ENST00000568955 471 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 MIR5588-201ENST00000581890 63 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF223E7ERA6 AC005086.4-201ENST00000623065 213 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF223E7ERA6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF223E7ERA6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF223E7ERA6 SDAD1P1-202ENST00000524156 2051 ntBASIC4.31□□□□□ -1.72
RNF223E7ERA6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF223E7ERA6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF223E7ERA6 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF223E7ERA6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
RNF223E7ERA6 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF223E7ERA6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF223E7ERA6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF223E7ERA6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF223E7ERA6 RNU6-888P-201ENST00000363010 101 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 RNU6-486P-201ENST00000363116 107 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 RNU6-1210P-201ENST00000363775 107 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 RN7SKP113-201ENST00000363891 295 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 RNU6-776P-201ENST00000364403 104 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 RNU6-1022P-201ENST00000365049 104 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 SNORD24-201ENST00000383884 75 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 SNORD14D-201ENST00000384390 87 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 SNORA12-201ENST00000391162 147 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 SNORA68.2-201ENST00000391263 128 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 SNORA11-201ENST00000408789 128 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 Y_RNA.601-201ENST00000410500 113 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 AL353689.1-201ENST00000438895 199 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF223E7ERA6 RNU7-61P-201ENST00000515897 61 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms