Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.85□□□□□ -2.11
NKX2-6A6NCS4 AC139792.3-201ENST00000623525 224 ntBASIC1.85□□□□□ -2.11
NKX2-6A6NCS4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.85□□□□□ -2.11
NKX2-6A6NCS4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
NKX2-6A6NCS4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 CDC27P3-201ENST00000635418 1910 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 MIR412-201ENST00000362142 91 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 Y_RNA.372-201ENST00000365599 102 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 RNU6-45P-201ENST00000384471 107 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 SNORD70.1-201ENST00000391007 85 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 RNU6-1140P-201ENST00000410517 106 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 RNU6-387P-201ENST00000411331 105 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 CYCSP33-201ENST00000414485 327 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 CALM1P1-201ENST00000442082 433 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 OSTCP8-201ENST00000445117 448 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 PSPHP1-201ENST00000450062 261 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 SCARNA18-201ENST00000459004 134 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 RNU7-63P-201ENST00000459054 62 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC107401.1-201ENST00000503426 685 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 RNU5F-8P-201ENST00000515941 111 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 Y_RNA.687-201ENST00000516558 91 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 SNORA31.18-201ENST00000517043 134 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC004223.2-201ENST00000590309 544 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 APOOP1-201ENST00000604695 592 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AF250324.2-201ENST00000608299 610 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 AP000553.5-201ENST00000641933 54 ntBASIC1.84□□□□□ -2.11
NKX2-6A6NCS4 KPNA2P1-201ENST00000458289 1591 ntBASIC1.84□□□□□ -2.12
NKX2-6A6NCS4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.84□□□□□ -2.12
NKX2-6A6NCS4 AL354685.2-201ENST00000448218 1447 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 RNU6-552P-201ENST00000362869 119 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 RNU1-17P-201ENST00000363022 152 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 RNU6-996P-201ENST00000365438 107 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 MIR583-201ENST00000384846 75 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 MIR147B-201ENST00000390185 80 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 SNORD23.1-201ENST00000408212 104 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 RNU2-3P-201ENST00000410144 191 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AC096649.2-201ENST00000416186 393 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 CYCSP49-201ENST00000420810 319 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 PTGES3P4-201ENST00000426243 356 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AL627311.1-201ENST00000431514 115 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 DNAJC19P4-201ENST00000440115 345 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AC073415.1-201ENST00000449240 153 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 RNU6-1038P-201ENST00000516516 104 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 Y_RNA.704-201ENST00000516851 102 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 MIR5692A1-201ENST00000580523 69 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AC008121.1-201ENST00000603244 268 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AC012507.3-201ENST00000603556 477 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AC092954.2-201ENST00000609103 430 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 U2.15-201ENST00000611544 191 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 U2.16-201ENST00000613119 191 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 U2.12-201ENST00000613778 191 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 U2.20-201ENST00000613956 192 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AP001486.3-201ENST00000615334 372 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 U2.9-201ENST00000615427 191 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 U2.11-201ENST00000616345 191 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 U2.2-201ENST00000616535 191 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 U2.3-201ENST00000617785 191 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 U2.19-201ENST00000618602 191 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 RNU2-1-201ENST00000618664 191 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 U2.6-201ENST00000619225 191 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 U2.5-201ENST00000619465 191 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 U2.10-201ENST00000620268 191 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms