Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL669831.1-202ENST00000428504 417 ntBASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 IFNA20P-201ENST00000436840 528 ntBASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 GTF2IP13-201ENST00000438487 386 ntBASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 RNU6-377P-201ENST00000515965 102 ntBASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL078605.1-201ENST00000603529 500 ntBASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC008993.2-201ENST00000631744 806 ntBASIC2□□□□□ -2.09
RNF103-CHMP3A0A140T963 CENPCP1-201ENST00000533085 2578 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 Y_RNA.201-201ENST00000364052 96 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 SNORA8-201ENST00000384574 139 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL356432.1-201ENST00000405809 419 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 RNU4-53P-201ENST00000410828 140 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 HMGN2P38-201ENST00000423806 265 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 CBX3P6-201ENST00000430257 527 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 RPL32P28-201ENST00000443577 397 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL118520.1-201ENST00000450770 291 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 RPL21P99-201ENST00000480369 423 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 MTCO3P28-201ENST00000513351 515 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC115990.1-201ENST00000526957 301 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC012414.6-201ENST00000568241 401 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL590229.1-201ENST00000603497 542 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 Z99289.3-201ENST00000605586 594 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 YWHAEP7-203ENST00000622054 312 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 MIR6873-201ENST00000622788 63 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 DUXAP9-208ENST00000622815 614 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 MTND5P6-201ENST00000422338 1798 ntBASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.99□□□□□ -2.09
RNF103-CHMP3A0A140T963 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 RNU4-91P-201ENST00000364778 135 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 RNU6-282P-201ENST00000365357 103 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 RNU4-48P-201ENST00000365559 182 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 MIR597-201ENST00000384968 97 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 SNORA11.4-201ENST00000408823 129 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 RNU6-248P-201ENST00000410720 107 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 RN7SKP284-201ENST00000411002 343 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC133104.1-201ENST00000429100 218 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC022364.2-201ENST00000457963 554 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC009646.1-201ENST00000510455 318 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 RNU5F-2P-201ENST00000516066 82 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 AP005639.2-201ENST00000527592 928 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 ANP32BP3-201ENST00000559213 706 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 APOOP1-201ENST00000604695 592 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC098657.3-201ENST00000620434 263 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 MIR1248-201ENST00000629190 106 ntBASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
RNF103-CHMP3A0A140T963 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 RNU6-1164P-201ENST00000364428 107 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 Y_RNA.510-201ENST00000384511 114 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 KATNBL1P3-201ENST00000443475 909 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 MTND1P18-201ENST00000448191 573 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC010486.2-201ENST00000505572 483 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC093259.1-201ENST00000509755 300 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 MTCO3P7-201ENST00000510008 774 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 RNU6-991P-201ENST00000516168 107 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 Y_RNA.717-201ENST00000517106 92 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC023050.3-201ENST00000541142 333 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 SNRPGP18-201ENST00000553000 214 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 OR11H5P-201ENST00000554039 926 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 MIR4672-201ENST00000583126 81 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 MIR4448-201ENST00000584360 86 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 BNIP3P25-201ENST00000596023 559 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL022345.1-201ENST00000607292 135 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC104073.3-201ENST00000610942 955 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 uc_338.11-201ENST00000619132 160 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 uc_338.20-201ENST00000621563 178 ntBASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RNF103-CHMP3A0A140T963 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 334.9 ms