Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 Y_RNA.80-201ENST00000362996 102 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 RNA5SP50-201ENST00000363731 107 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-1141P-201ENST00000364520 107 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 U3.13-201ENST00000364804 214 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-1286P-201ENST00000383871 107 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 Y_RNA.485-201ENST00000384395 102 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-1222P-201ENST00000384615 107 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AC093578.1-201ENST00000415219 368 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AC138623.1-201ENST00000418060 216 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 DBIP2-201ENST00000419076 262 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 EIF1AXP1-201ENST00000419267 435 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AC007098.1-201ENST00000420122 367 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 MTCYBP10-201ENST00000424905 650 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AC096644.2-201ENST00000429278 159 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 Z82188.1-201ENST00000436709 154 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AL353705.4-201ENST00000449661 238 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 CYCSP35-201ENST00000451978 304 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 RNU7-169P-201ENST00000459456 61 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AP001324.2-201ENST00000461163 319 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 RPL30P10-201ENST00000488148 337 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 RPL30P1-201ENST00000488676 339 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-1045P-201ENST00000516321 107 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 RNU5B-3P-201ENST00000516601 115 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 RNU4-77P-201ENST00000516692 156 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AC007375.1-201ENST00000554513 578 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 DNAJC8P1-201ENST00000554535 372 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AC069200.1-201ENST00000609511 323 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AC002064.3-201ENST00000623448 346 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 SNORA43.4-201ENST00000629559 138 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AC110079.1-202ENST00000635213 138 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 ZNF72P-201ENST00000425869 1908 ntBASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 SNORA63.1-201ENST00000362493 131 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 Y_RNA.39-201ENST00000362620 98 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-799P-201ENST00000363567 107 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 Y_RNA.158-201ENST00000363651 101 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 AC117470.1-201ENST00000381974 330 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 Y_RNA.405-201ENST00000383979 100 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 Y_RNA.451-201ENST00000384200 100 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 Y_RNA.524-201ENST00000384564 100 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 Y_RNA.561-201ENST00000384694 100 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 MIR625-201ENST00000385047 85 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 RNU2-23P-201ENST00000410545 195 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 AL358453.1-201ENST00000422522 250 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 AC244670.1-201ENST00000436879 112 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 GPM6BP3-201ENST00000442797 145 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 CHEK2P4-201ENST00000450340 246 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 AL353752.1-201ENST00000454946 260 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 RN7SKP210-201ENST00000459176 261 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 RPS4XP22-201ENST00000480755 780 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 RN7SL293P-201ENST00000481765 281 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 AC021146.2-201ENST00000504736 556 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 RAC1P5-201ENST00000512182 576 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 RNU7-4P-201ENST00000516961 62 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 AC023442.1-201ENST00000531247 422 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 MIR4680-201ENST00000580906 66 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 RPS15AP11-201ENST00000594193 385 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 AC008737.2-201ENST00000599446 118 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 7SK.7-201ENST00000603504 247 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 AL356157.2-201ENST00000605122 111 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 AC110741.2-201ENST00000605278 268 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.55□□□□□ -2
IGHV4-28A0A0C4DH34 AC005592.1-201ENST00000566527 1640 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 AC093908.1-201ENST00000623125 8092 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-874P-201ENST00000362390 105 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-212P-201ENST00000362642 104 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 SNORD46.1-201ENST00000364139 104 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms