Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 MTCO2P7-201ENST00000446518 666 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AL021397.1-201ENST00000451806 248 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 BTF3P15-201ENST00000455606 336 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 TPTE2P5-203ENST00000458118 728 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 SCARNA18-201ENST00000459004 134 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AC090515.1-201ENST00000465295 476 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 HMGB1P29-201ENST00000505659 499 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 HIF1AP1-201ENST00000553642 175 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AL118558.2-201ENST00000556294 238 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AC110588.1-201ENST00000559699 137 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 MIR3199-1-201ENST00000582434 88 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AL138889.2-201ENST00000603883 242 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AC008945.2-201ENST00000606056 604 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AC002044.1-201ENST00000606707 158 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AC097372.5-201ENST00000623665 376 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AP003400.5-201ENST00000624827 617 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.16
TRAV40A0A0B4J280 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.59□□□□□ -2.16
TRAV40A0A0B4J280 AC026241.1-201ENST00000517873 2142 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 MIR412-201ENST00000362142 91 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-858P-201ENST00000362436 107 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 RNU1-72P-201ENST00000362976 153 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 RNA5SP99-201ENST00000364020 114 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-996P-201ENST00000365438 107 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 RNU4-20P-201ENST00000365601 151 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-19P-201ENST00000384718 107 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-482P-201ENST00000391068 107 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 RNA5SP338-201ENST00000410495 85 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-607P-201ENST00000411283 108 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 MTCO3P41-201ENST00000414801 328 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AC096649.2-201ENST00000416186 393 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 EIF1AXP1-201ENST00000419267 435 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 PTGES3P4-201ENST00000426243 356 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AL627311.1-201ENST00000431514 115 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 OSTCP8-201ENST00000445117 448 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 RPL23AP7-203ENST00000449021 469 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 RNU7-180P-201ENST00000459240 63 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AC112771.1-201ENST00000463581 102 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AC025033.1-201ENST00000463883 194 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 RPL7P43-201ENST00000478876 753 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AC079382.1-201ENST00000493346 557 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 RPL23AP63-201ENST00000498752 471 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 SMURF2P1-201ENST00000514992 481 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 RNU2-69P-201ENST00000516061 100 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 MIR5002-201ENST00000584713 97 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 SNRPGP19-201ENST00000603826 189 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 AC124864.2-201ENST00000624736 186 ntBASIC1.58□□□□□ -2.16
TRAV40A0A0B4J280 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 Y_RNA.3-201ENST00000362331 103 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-37P-201ENST00000362692 107 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-1159P-201ENST00000362933 107 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-1090P-201ENST00000364065 94 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-11P-201ENST00000364234 107 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNA5SP160-201ENST00000364866 120 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-25P-201ENST00000383873 107 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-1-201ENST00000383898 107 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-48P-201ENST00000384161 107 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-36P-201ENST00000384172 107 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-4P-201ENST00000384205 107 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-5P-201ENST00000384238 107 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-3P-201ENST00000384314 107 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-16P-201ENST00000384385 107 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-15P-201ENST00000384534 107 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-2-201ENST00000384627 107 ntBASIC1.57□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-29P-201ENST00000384637 107 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms