Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC010615.1-201ENST00000594254 1764 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 AL391994.1-201ENST00000254724 282 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 RNY1P10-201ENST00000363268 113 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 RNU6-216P-201ENST00000363282 104 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 RNU6-487P-201ENST00000365430 104 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 RNU6-622P-201ENST00000384272 103 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 SNORD12-201ENST00000391002 90 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 RNU6-321P-201ENST00000410912 106 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 AC063976.4-201ENST00000421971 163 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 MTND1P30-201ENST00000441241 901 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 AC114981.1-201ENST00000503897 678 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 RNU6-572P-201ENST00000516724 80 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 RNA5SP481-201ENST00000516814 122 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 AC018659.1-201ENST00000551083 169 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 AL121579.1-201ENST00000555129 305 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 MIR4498-201ENST00000577599 66 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 FAM106DP-201ENST00000586416 501 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 AC107304.1-201ENST00000604229 296 ntBASIC0.22□□□□□ -2.37
TRAV1-2A0A0B4J238 AC023934.1-201ENST00000574529 2389 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 MIR340-201ENST00000362125 95 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU4-79P-201ENST00000362764 141 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-1207P-201ENST00000384343 107 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-1176P-201ENST00000390955 107 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 Y_RNA.597-201ENST00000410463 100 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 AC104651.1-201ENST00000427559 735 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 AC099677.2-201ENST00000436385 175 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 AL358794.1-201ENST00000445689 381 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 AC009646.1-201ENST00000510455 318 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 AP000889.1-201ENST00000530968 660 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 AC078795.2-201ENST00000602835 1252 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 AC022022.2-201ENST00000602989 360 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 AL353765.1-201ENST00000605514 183 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 AC083806.3-201ENST00000614016 455 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 AC106858.1-201ENST00000637497 429 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.21□□□□□ -2.38
TRAV1-2A0A0B4J238 Y_RNA.25-201ENST00000362528 102 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-97P-201ENST00000363387 104 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-910P-201ENST00000390844 107 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU2-23P-201ENST00000410545 195 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 RAB28P5-201ENST00000427490 651 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 MTCO3P18-201ENST00000440206 761 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 AC007000.2-201ENST00000442564 487 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 RPL37P6-201ENST00000460682 294 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 MTCO3P7-201ENST00000510008 774 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 AC079140.3-201ENST00000511111 550 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 RNA5SP255-201ENST00000516370 107 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 AC104417.1-201ENST00000523974 751 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 AC138915.2-201ENST00000569776 97 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 AL590229.1-201ENST00000603497 542 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 KATNBL1P5-201ENST00000605015 517 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 AL451064.1-201ENST00000607718 471 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 MIR3529-201ENST00000637713 78 ntBASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
TRAV1-2A0A0B4J238 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-549P-201ENST00000384433 107 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 SNORA40C-201ENST00000391285 128 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU2-7P-201ENST00000410794 178 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-1054P-201ENST00000411293 104 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 TXNL1P1-201ENST00000429528 554 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 RPS15AP10-201ENST00000432472 382 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 RNFT1P2-201ENST00000443064 757 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 SNORD79.1-201ENST00000516069 84 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 AC023538.1-201ENST00000534576 736 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 AC025423.5-201ENST00000550230 219 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 AC044913.1-201ENST00000557200 430 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 ZNF971P-201ENST00000562068 1249 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 BNIP3P30-201ENST00000601184 574 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 AC063943.3-201ENST00000615562 356 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 RMST_4.1-201ENST00000616886 107 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 AC010975.3-201ENST00000618727 978 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 AC068787.1-201ENST00000623908 691 ntBASIC0.19□□□□□ -2.38
TRAV1-2A0A0B4J238 snoU2_19.1-201ENST00000362361 80 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU4-12P-201ENST00000365233 139 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-348P-201ENST00000384386 107 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-1235P-201ENST00000384559 107 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-331P-201ENST00000384724 107 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms