Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA4Q9Y5G9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA4Q9Y5G9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 RN7SKP280-201ENST00000364196 304 ntBASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 RNU6-335P-201ENST00000364563 113 ntBASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 SNORA16A-201ENST00000384342 137 ntBASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 MIR708-201ENST00000390708 88 ntBASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 PTMAP5-201ENST00000393073 333 ntBASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 NDUFB4P8-201ENST00000435351 367 ntBASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 AC073850.1-201ENST00000449243 255 ntBASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 ATP5EP1-201ENST00000510257 156 ntBASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 RNA5SP395-201ENST00000516567 118 ntBASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 RNU2-44P-201ENST00000516795 194 ntBASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 RNU6-365P-201ENST00000517113 106 ntBASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 RNA5SP108-201ENST00000605921 117 ntBASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 AL159152.1-201ENST00000635019 2587 ntBASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA4Q9Y5G9 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
PCDHGA4Q9Y5G9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 RNY1P10-201ENST00000363268 113 ntBASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 SNORA67-201ENST00000384423 137 ntBASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 EIF4A1P3-201ENST00000411521 244 ntBASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 SRSF1P1-201ENST00000424058 520 ntBASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 AC068287.1-201ENST00000430283 295 ntBASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 AC006466.1-201ENST00000438721 289 ntBASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 RPL23AP56-201ENST00000460778 453 ntBASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 SCARNA16.4-201ENST00000516956 187 ntBASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 AC006116.3-201ENST00000592968 361 ntBASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 MIR3202-2-201ENST00000635980 79 ntBASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 AL136360.1-201ENST00000503377 1900 ntBASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 ASNSP1-201ENST00000518311 1939 ntBASIC5.21□□□□□ -1.58
PCDHGA4Q9Y5G9 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 Y_RNA.221-201ENST00000364248 96 ntBASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 RNU6-1197P-201ENST00000391183 107 ntBASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 SNORD77.4-201ENST00000516158 81 ntBASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 ACA59.2-201ENST00000517061 156 ntBASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 uc_338.7-201ENST00000621834 124 ntBASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 AC100757.1-201ENST00000616872 1835 ntBASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 AC112198.2-201ENST00000426589 6996 ntBASIC5.2□□□□□ -1.58
PCDHGA4Q9Y5G9 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 MIR133B-201ENST00000362210 119 ntBASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 RNU1-94P-201ENST00000362627 173 ntBASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 AC002075.2-201ENST00000425207 252 ntBASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 PGBD4P5-201ENST00000445958 426 ntBASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 RPL7AP28-201ENST00000464513 571 ntBASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 BX284632.1-201ENST00000478218 541 ntBASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 RPS27AP10-201ENST00000496103 208 ntBASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 RNU6-521P-201ENST00000516663 105 ntBASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 AC105137.2-201ENST00000569073 466 ntBASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 uc_338.4-201ENST00000616635 176 ntBASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms