Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 HSPE1P26-201ENST00000405341 275 ntBASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 RPS20P14-201ENST00000412545 360 ntBASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 GPM6BP3-201ENST00000442797 145 ntBASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 RPL35AP15-201ENST00000468042 339 ntBASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 MIR3690-201ENST00000580266 75 ntBASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 AL138963.2-201ENST00000605137 226 ntBASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 AC108706.1-201ENST00000611053 297 ntBASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 MTND1P7-201ENST00000632801 297 ntBASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.6
ZC3H4Q9UPT8 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.09□□□□□ -1.6
ZC3H4Q9UPT8 AC008568.2-201ENST00000623862 2313 ntBASIC5.09□□□□□ -1.6
ZC3H4Q9UPT8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.09□□□□□ -1.6
ZC3H4Q9UPT8 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.09□□□□□ -1.6
ZC3H4Q9UPT8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 ZNF204P-201ENST00000416749 2397 ntBASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 Y_RNA.136-201ENST00000363444 102 ntBASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 Y_RNA.272-201ENST00000364696 102 ntBASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 U8.10-201ENST00000384260 133 ntBASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 MTHFD2P2-201ENST00000407725 247 ntBASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 BMS1P22-201ENST00000414726 313 ntBASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 AC138623.1-201ENST00000418060 216 ntBASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 AC091178.1-203ENST00000584586 279 ntBASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 uc_338.32-201ENST00000615087 172 ntBASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ZC3H4Q9UPT8 RNU6-1290P-201ENST00000362957 109 ntBASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 RNU4-56P-201ENST00000364700 142 ntBASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 Y_RNA.343-201ENST00000365354 112 ntBASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 RNU6-1130P-201ENST00000365434 107 ntBASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 Y_RNA.435-201ENST00000384095 112 ntBASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 MIR329-1-201ENST00000385028 80 ntBASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 RNU6-159P-201ENST00000391080 106 ntBASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 RN7SKP167-201ENST00000411047 285 ntBASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 HMGN2P31-201ENST00000432430 273 ntBASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 SNORA31.8-201ENST00000516327 108 ntBASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 RNU6-62P-201ENST00000516526 102 ntBASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 HSPE1P4-201ENST00000550617 308 ntBASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 AL133383.2-201ENST00000622958 2336 ntBASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 AL035425.3-201ENST00000564206 4996 ntBASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
ZC3H4Q9UPT8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 AF117829.1-206ENST00000621883 3802 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 RNA5SP307-201ENST00000362863 116 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 Z98749.2-208ENST00000381646 500 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 MIR218-2-201ENST00000385006 110 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 ABCF2P2-201ENST00000450549 296 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 RNU6-313P-201ENST00000516317 112 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 RNU1-103P-201ENST00000516502 125 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 RNU6-58P-201ENST00000517143 103 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 AC090281.1-201ENST00000523019 276 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 ZNF192P1-203ENST00000565888 810 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 MIR4513-201ENST00000581077 86 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 AC005000.2-201ENST00000605468 310 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 SNORA43.4-201ENST00000629559 138 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ZC3H4Q9UPT8 RNU5B-2P-201ENST00000363036 113 ntBASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 SNORD32A-201ENST00000364805 84 ntBASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 RNU6-22P-201ENST00000384355 107 ntBASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 Y_RNA.497-201ENST00000384447 98 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms