Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 SNORA31.8-201ENST00000516327 108 ntBASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 SNORA27.4-201ENST00000516650 95 ntBASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 AC053481.4-201ENST00000583164 216 ntBASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 KLKP1-201ENST00000595979 403 ntBASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 AL591034.3-201ENST00000605511 685 ntBASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 U2.21-201ENST00000637295 81 ntBASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 AC008568.2-201ENST00000623862 2313 ntBASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 BX322639.1-202ENST00000423987 2213 ntBASIC4.15□□□□□ -1.74
AP4E1Q9UPM8 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.15□□□□□ -1.74
AP4E1Q9UPM8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
AP4E1Q9UPM8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
AP4E1Q9UPM8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
AP4E1Q9UPM8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.15□□□□□ -1.74
AP4E1Q9UPM8 Y_RNA.230-201ENST00000364348 109 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 Y_RNA.398-201ENST00000383952 99 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 RNU6-20P-201ENST00000384106 107 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 RNU6-281P-201ENST00000384212 103 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 RNU6-1081P-201ENST00000384537 107 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 MIR329-1-201ENST00000385028 80 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 SNORA46.1-201ENST00000391069 153 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 AL356095.1-201ENST00000417217 199 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 MRPS10P1-201ENST00000448483 130 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 TPT1P12-201ENST00000448968 492 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 AC006026.2-201ENST00000457376 180 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 AC016256.1-201ENST00000547971 354 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 AC107016.1-201ENST00000550463 337 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 RPL21P9-201ENST00000556149 474 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 UBL5P4-201ENST00000562584 236 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 MIR5695-201ENST00000579717 85 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 MIR6867-201ENST00000610636 67 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 AC023043.4-201ENST00000612081 449 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 AC005296.1-201ENST00000616145 209 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 AC135776.4-201ENST00000624300 1904 ntBASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
AP4E1Q9UPM8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 RNU6-626P-201ENST00000363354 107 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 RNA5SP399-201ENST00000364003 117 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 RNU6-923P-201ENST00000364753 107 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 RNU6-1175P-201ENST00000365200 107 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 RNU6-898P-201ENST00000365627 104 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 MIR487A-201ENST00000385009 80 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 U3.39-201ENST00000408569 239 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 RNU6-1135P-201ENST00000411083 103 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AL390729.2-201ENST00000416137 156 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AC092047.1-201ENST00000424997 240 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AC007395.1-201ENST00000451333 677 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 RPL23AP3-201ENST00000453844 468 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 RNU6-1219P-201ENST00000516143 112 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AL391261.3-201ENST00000557194 520 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 MIR4308-201ENST00000580634 81 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AC008749.1-201ENST00000597650 306 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AP001485.1-201ENST00000604799 199 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AL590392.1-201ENST00000604960 446 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AC104465.1-201ENST00000611365 139 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 AL591424.2-201ENST00000617023 128 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.14□□□□□ -1.75
AP4E1Q9UPM8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms