Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC008267.6-201ENST00000441664 139 ntBASIC4.89□□□□□ -1.63
COL17A1Q9UMD9 AL390123.1-201ENST00000603216 237 ntBASIC4.89□□□□□ -1.63
COL17A1Q9UMD9 AL589994.2-201ENST00000621124 579 ntBASIC4.89□□□□□ -1.63
COL17A1Q9UMD9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.89□□□□□ -1.63
COL17A1Q9UMD9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.89□□□□□ -1.63
COL17A1Q9UMD9 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.89□□□□□ -1.63
COL17A1Q9UMD9 AC006504.1-201ENST00000562493 3666 ntBASIC4.89□□□□□ -1.63
COL17A1Q9UMD9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL17A1Q9UMD9 SNORD62.1-201ENST00000362541 86 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 RNU6-1020P-201ENST00000363684 107 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 RNU6-178P-201ENST00000384631 104 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 RNU6-95P-201ENST00000384697 107 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 LAP3P1-201ENST00000403648 294 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 RNU2-52P-201ENST00000410680 190 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 Y_RNA.626-201ENST00000411288 95 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 RNA5SP111-201ENST00000411386 101 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 SSXP4-201ENST00000451349 245 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AC074133.1-201ENST00000515696 183 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 RNU6-1338P-201ENST00000516328 91 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 SCARNA24.2-201ENST00000516968 130 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 RNU6-685P-201ENST00000517088 95 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AC233702.2-202ENST00000562547 291 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 MIR5692C1-201ENST00000585309 91 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AL359881.1-201ENST00000602916 267 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AC174048.1-201ENST00000603389 144 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AC009570.1-201ENST00000609599 745 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AC100821.1-201ENST00000523153 2479 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 Y_RNA.343-201ENST00000365354 112 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 RNU6-946P-201ENST00000383878 107 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AL031274.1-201ENST00000450334 232 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 ANP32BP2-201ENST00000454525 545 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 Y_RNA.676-201ENST00000516393 96 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AC026333.2-201ENST00000542164 106 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 VN1R91P-201ENST00000594377 169 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AC020914.4-201ENST00000597690 277 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 RPS29P30-201ENST00000600975 111 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 AL161423.1-201ENST00000613700 262 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 MIR4275-201ENST00000636486 87 ntBASIC4.88□□□□□ -1.63
COL17A1Q9UMD9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 SNORA63.4-201ENST00000362763 126 ntBASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 RNU6-434P-201ENST00000384376 107 ntBASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 RNU6-1127P-201ENST00000384580 107 ntBASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 MIR504-201ENST00000385065 83 ntBASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 Y_RNA.586-201ENST00000391146 98 ntBASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 AC006989.1-201ENST00000427212 131 ntBASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 AC016925.1-201ENST00000458303 298 ntBASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 AC008521.1-201ENST00000587471 187 ntBASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 TUG1_2.1-201ENST00000614234 87 ntBASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.87□□□□□ -1.63
COL17A1Q9UMD9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 RBBP8P1-201ENST00000449447 1844 ntBASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 Y_RNA.240-201ENST00000364469 95 ntBASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 RNU6-393P-201ENST00000384475 107 ntBASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 Y_RNA.568-201ENST00000384742 113 ntBASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 MIR887-201ENST00000401258 79 ntBASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 RPL23AP36-201ENST00000413895 458 ntBASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 BX682237.1-201ENST00000415016 335 ntBASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 AL353997.1-201ENST00000432936 108 ntBASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 AL162389.1-201ENST00000449233 177 ntBASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 RPL37P6-202ENST00000464216 403 ntBASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 AC087385.1-201ENST00000475062 312 ntBASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 RPL17P19-201ENST00000489069 552 ntBASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 AC107918.3-201ENST00000533272 382 ntBASIC4.86□□□□□ -1.63
COL17A1Q9UMD9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms