Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SNORD73A-201ENST00000386062 65 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AL024474.1-201ENST00000404655 591 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 TOMM20P4-201ENST00000427861 435 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 RPL37P4-201ENST00000448908 268 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 RNU7-169P-201ENST00000459456 61 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AC098869.1-201ENST00000481627 292 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 RNU6-1338P-201ENST00000516328 91 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 RNU6-62P-201ENST00000516526 102 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.689-201ENST00000516589 107 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AL133271.1-201ENST00000538229 291 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AC025423.5-201ENST00000550230 219 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AC072026.1-201ENST00000605023 201 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AC011978.2-201ENST00000569835 2054 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.16-201ENST00000362421 102 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.105-201ENST00000363182 111 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 RNU6-1284P-201ENST00000363701 100 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.214-201ENST00000364201 112 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 SMIM11P1-201ENST00000369586 178 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.458-201ENST00000384240 102 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AL136372.1-201ENST00000403060 228 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 RN7SKP220-201ENST00000410611 288 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 RNU6-1135P-201ENST00000411083 103 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 TMEM167AP1-201ENST00000423409 219 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 RPS26P47-201ENST00000427219 348 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AP002770.2-201ENST00000543613 532 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AC067852.4-201ENST00000590314 478 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 ELOCP5-201ENST00000604924 333 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AL590099.1-201ENST00000615276 138 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 AC073476.4-201ENST00000628409 72 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 RNU6-417P-201ENST00000384712 107 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 SNORD115-46-201ENST00000390982 71 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 AL591034.2-201ENST00000402839 359 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 RNU4-78P-201ENST00000410940 126 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 RNA5SP107-201ENST00000411358 122 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 COX6CP10-201ENST00000416832 224 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 MTCO1P5-201ENST00000433573 344 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 RNU7-167P-201ENST00000459160 62 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 RNU7-120P-201ENST00000459334 63 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 RNU6-27P-201ENST00000516146 107 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 MIR3144-201ENST00000579460 79 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 AC115085.1-201ENST00000588924 229 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 AC068647.1-201ENST00000489539 2265 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 RNU6-288P-201ENST00000363690 104 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.343-201ENST00000365354 112 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 RNU6-441P-201ENST00000384545 106 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.526-201ENST00000384572 110 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 RNU6-754P-201ENST00000391166 107 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 RN7SKP51-201ENST00000410781 304 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 UBE2D3P2-201ENST00000424409 445 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 COX7A2P2-201ENST00000505291 250 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 SEPT14P8-201ENST00000508026 178 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 SERF1AP1-201ENST00000514575 187 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 AL078605.1-201ENST00000603529 500 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 AL591516.1-201ENST00000611326 274 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 MIR622-201ENST00000638396 96 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 EXOC5P1-201ENST00000510543 1969 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 AC020633.1-201ENST00000468439 2247 ntBASIC2.41□□□□□ -2.02
NOTCH3Q9UM47 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 XIAPP3-201ENST00000312918 795 ntBASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 SNORD62.1-201ENST00000362541 86 ntBASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 SNORD50.1-201ENST00000362987 71 ntBASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 RNU1-140P-201ENST00000365040 165 ntBASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms