Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 DYNLT3P1-201ENST00000378574 347 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 RNU6-393P-201ENST00000384475 107 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 MTCO2P19-201ENST00000427513 598 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AL118520.1-201ENST00000450770 291 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 MRPL42P6-201ENST00000486397 371 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AP004607.1-201ENST00000524456 203 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 GNAI2P1-201ENST00000541815 315 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AC105137.2-201ENST00000569073 466 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AC023043.2-201ENST00000589678 1026 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AC017083.3-201ENST00000609955 700 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 AL354950.2-201ENST00000617939 290 ntBASIC4.18□□□□□ -1.74
SHROOM4Q9ULL8 RNU4-24P-201ENST00000364565 139 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 Y_RNA.436-201ENST00000384097 102 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 Y_RNA.559-201ENST00000384686 107 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 RPL21P75-201ENST00000396599 483 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 RPL21P28-201ENST00000401418 483 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 AL592114.1-201ENST00000403842 483 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 AC097463.2-201ENST00000421074 142 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 AC000111.3-201ENST00000433478 193 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 AP001324.2-201ENST00000461163 319 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 RPL21P39-201ENST00000463605 483 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 RPL21P93-201ENST00000480465 489 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 AC087190.1-201ENST00000484462 480 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 AC093591.1-201ENST00000491435 481 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 RPL21P16-201ENST00000495531 483 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 AK6P1-201ENST00000540219 478 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 AL391646.1-201ENST00000603860 190 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 AC010378.1-201ENST00000619270 362 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 AC124864.2-201ENST00000624736 186 ntBASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHROOM4Q9ULL8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 RNU6-384P-201ENST00000364900 104 ntBASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 RNU6-996P-201ENST00000365438 107 ntBASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 RNU6-903P-201ENST00000391270 109 ntBASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 CIR1P3-201ENST00000405137 479 ntBASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 RNU2-16P-201ENST00000410712 136 ntBASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 AC016907.1-201ENST00000419483 435 ntBASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 AC023141.11-201ENST00000508864 202 ntBASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 MIR3941-201ENST00000582572 103 ntBASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 RPL23AP88-201ENST00000605759 454 ntBASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 AC026585.1-201ENST00000619582 524 ntBASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 AC138627.2-201ENST00000624202 601 ntBASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 MIR3529-201ENST00000637713 78 ntBASIC4.16□□□□□ -1.74
SHROOM4Q9ULL8 RNU6-942P-201ENST00000363002 107 ntBASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 RNU6-486P-201ENST00000363116 107 ntBASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 RNU6-715P-201ENST00000365204 103 ntBASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 Y_RNA.540-201ENST00000384638 111 ntBASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 SNORD70.1-201ENST00000391007 85 ntBASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 RNA5SP492-201ENST00000411330 114 ntBASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 AL365400.1-201ENST00000431854 640 ntBASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 SCARNA18-201ENST00000459004 134 ntBASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 RNU1-86P-201ENST00000516108 154 ntBASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 RNU1-107P-201ENST00000516617 154 ntBASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 AGGF1P4-201ENST00000568249 801 ntBASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 MIR3199-1-201ENST00000582434 88 ntBASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 AL021997.1-201ENST00000605757 193 ntBASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 OR5AK4P-201ENST00000635912 903 ntBASIC4.15□□□□□ -1.75
SHROOM4Q9ULL8 MIR218-1-201ENST00000384999 110 ntBASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 U6atac.2-201ENST00000408644 118 ntBASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 TIMM9P3-201ENST00000428659 274 ntBASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 SRRM1P2-201ENST00000464531 1192 ntBASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 AC011005.2-201ENST00000487324 359 ntBASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 AC078814.3-201ENST00000553036 491 ntBASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 AC008752.3-201ENST00000588113 712 ntBASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 AC009831.4-201ENST00000620744 325 ntBASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 MIR6863-201ENST00000636112 90 ntBASIC4.14□□□□□ -1.75
SHROOM4Q9ULL8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM4Q9ULL8 RNU6-623P-201ENST00000363143 105 ntBASIC4.13□□□□□ -1.75
SHROOM4Q9ULL8 Y_RNA.480-201ENST00000384364 102 ntBASIC4.13□□□□□ -1.75
SHROOM4Q9ULL8 BX682237.1-201ENST00000415016 335 ntBASIC4.13□□□□□ -1.75
SHROOM4Q9ULL8 AL163973.1-201ENST00000484753 577 ntBASIC4.13□□□□□ -1.75
SHROOM4Q9ULL8 TBCAP3-201ENST00000512475 312 ntBASIC4.13□□□□□ -1.75
SHROOM4Q9ULL8 AC090616.3-201ENST00000582184 217 ntBASIC4.13□□□□□ -1.75
SHROOM4Q9ULL8 AL136363.2-201ENST00000604173 851 ntBASIC4.13□□□□□ -1.75
SHROOM4Q9ULL8 AC069294.1-201ENST00000608397 350 ntBASIC4.13□□□□□ -1.75
SHROOM4Q9ULL8 AC093783.1-201ENST00000612976 329 ntBASIC4.13□□□□□ -1.75
SHROOM4Q9ULL8 RMST_4.1-201ENST00000616886 107 ntBASIC4.13□□□□□ -1.75
SHROOM4Q9ULL8 AL031601.2-202ENST00000622650 282 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms