Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC136443.5-201ENST00000603741 370 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 AC009229.3-201ENST00000608056 282 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
USP25Q9UHP3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.63□□□□□ -1.83
USP25Q9UHP3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.62□□□□□ -1.83
USP25Q9UHP3 ADAM3A-203ENST00000461344 2157 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 Y_RNA.5-201ENST00000362334 102 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 RNU6-890P-201ENST00000384121 107 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 RNU6-308P-201ENST00000390957 107 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 Y_RNA.594-201ENST00000410373 140 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 RNU6-1050P-201ENST00000410388 107 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 Y_RNA.623-201ENST00000411128 95 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 RNU6-293P-201ENST00000411259 106 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 AC023141.4-201ENST00000412031 328 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 CYCSP33-201ENST00000414485 327 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.62□□□□□ -1.83
USP25Q9UHP3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.62□□□□□ -1.83
USP25Q9UHP3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.62□□□□□ -1.83
USP25Q9UHP3 AC091286.1-201ENST00000431233 461 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 AL035666.1-201ENST00000446195 348 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 HMGN2P10-201ENST00000448085 265 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 AL583843.1-201ENST00000456070 346 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.62□□□□□ -1.83
USP25Q9UHP3 AC092436.3-201ENST00000511788 257 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.62□□□□□ -1.83
USP25Q9UHP3 AC021739.1-201ENST00000559631 174 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 CYCSP39-201ENST00000565821 309 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.62□□□□□ -1.83
USP25Q9UHP3 AL451007.1-201ENST00000595491 289 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.62□□□□□ -1.83
USP25Q9UHP3 SRGNP1-201ENST00000603392 451 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 AL645944.1-201ENST00000603857 493 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 AL161423.1-201ENST00000613700 262 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 PISRT1.1-201ENST00000616930 107 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 AC008121.3-201ENST00000618726 433 ntBASIC3.62□□□□□ -1.83
USP25Q9UHP3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.62□□□□□ -1.83
USP25Q9UHP3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.61□□□□□ -1.83
USP25Q9UHP3 AC138393.1-203ENST00000327086 343 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 RNU1-33P-201ENST00000364249 162 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 RNU6-1329P-201ENST00000365664 107 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.61□□□□□ -1.83
USP25Q9UHP3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.61□□□□□ -1.83
USP25Q9UHP3 AL627311.1-201ENST00000431514 115 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.61□□□□□ -1.83
USP25Q9UHP3 MTND3P2-201ENST00000438452 342 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 RPS12P18-201ENST00000442381 270 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 RPS3AP12-201ENST00000443616 753 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 MIR2053-201ENST00000459295 91 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 RPS26P21-201ENST00000475397 348 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.61□□□□□ -1.83
USP25Q9UHP3 RAC1P5-201ENST00000512182 576 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 RN7SKP295-201ENST00000517264 153 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 AC007458.1-201ENST00000542812 373 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.61□□□□□ -1.83
USP25Q9UHP3 MIR2682-201ENST00000580305 110 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 AL161756.2-201ENST00000604597 246 ntBASIC3.61□□□□□ -1.83
USP25Q9UHP3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
USP25Q9UHP3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.61□□□□□ -1.83
USP25Q9UHP3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP25Q9UHP3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
USP25Q9UHP3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
USP25Q9UHP3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP25Q9UHP3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
USP25Q9UHP3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
USP25Q9UHP3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.6□□□□□ -1.83
USP25Q9UHP3 Y_RNA.148-201ENST00000363557 117 ntBASIC3.6□□□□□ -1.83
USP25Q9UHP3 Y_RNA.252-201ENST00000364556 101 ntBASIC3.6□□□□□ -1.83
USP25Q9UHP3 Y_RNA.404-201ENST00000383978 102 ntBASIC3.6□□□□□ -1.83
USP25Q9UHP3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.6□□□□□ -1.83
USP25Q9UHP3 HMGN2P31-201ENST00000432430 273 ntBASIC3.6□□□□□ -1.83
USP25Q9UHP3 RPS29P12-201ENST00000460178 152 ntBASIC3.6□□□□□ -1.83
USP25Q9UHP3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.6□□□□□ -1.83
USP25Q9UHP3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.6□□□□□ -1.83
USP25Q9UHP3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.6□□□□□ -1.83
USP25Q9UHP3 AC008737.2-201ENST00000599446 118 ntBASIC3.6□□□□□ -1.83
USP25Q9UHP3 AL162713.1-201ENST00000604480 262 ntBASIC3.6□□□□□ -1.83
USP25Q9UHP3 ELOCP5-201ENST00000604924 333 ntBASIC3.6□□□□□ -1.83
USP25Q9UHP3 AC007179.3-201ENST00000604976 235 ntBASIC3.6□□□□□ -1.83
USP25Q9UHP3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.6□□□□□ -1.83
USP25Q9UHP3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.6□□□□□ -1.83
USP25Q9UHP3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
USP25Q9UHP3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP25Q9UHP3 AC099654.7-201ENST00000635788 2127 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
USP25Q9UHP3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.59□□□□□ -1.83
USP25Q9UHP3 MTND5P30-201ENST00000452896 1731 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 Z98749.2-208ENST00000381646 500 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 Y_RNA.463-201ENST00000384271 102 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 MIR483-201ENST00000385070 76 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP25Q9UHP3 RNU2-49P-201ENST00000410666 184 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 RNA5SP344-201ENST00000411081 104 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.59□□□□□ -1.83
USP25Q9UHP3 AC093151.1-201ENST00000427711 313 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.59□□□□□ -1.83
USP25Q9UHP3 AC236972.1-201ENST00000433225 199 ntBASIC3.59□□□□□ -1.83
USP25Q9UHP3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.59□□□□□ -1.83
USP25Q9UHP3 BTF3P15-201ENST00000455606 336 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms