Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL365338.1-201ENST00000422282 858 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AL645568.3-201ENST00000433683 316 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AL583843.1-201ENST00000456070 346 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AP001324.2-201ENST00000461163 319 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 HMGB1P30-201ENST00000492455 606 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AC010486.3-201ENST00000511602 785 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 RNU5B-3P-201ENST00000516601 115 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AC012414.6-201ENST00000568241 401 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AC068790.2-201ENST00000602601 557 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AC064872.1-201ENST00000604823 1072 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AC096772.1-201ENST00000609146 564 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AC092656.1-203ENST00000624134 423 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 AC080100.1-201ENST00000624239 5356 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 MTCYBP5-201ENST00000423752 1135 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 MTATP6P16-201ENST00000434543 526 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 IPO7P1-201ENST00000442031 636 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 RPS27AP8-201ENST00000452665 445 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 RPL36AP48-201ENST00000485521 314 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 AC018437.1-201ENST00000492214 406 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 AC022493.1-201ENST00000492984 337 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 SNORA25.15-201ENST00000516487 89 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 MIR514B-201ENST00000516774 80 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 RNA5SP364-201ENST00000516938 78 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 AC092325.1-201ENST00000566449 554 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 MIR3618-201ENST00000580330 88 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 AC008521.1-201ENST00000587471 187 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 MIR8070-201ENST00000616510 88 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 uc_338.11-201ENST00000619132 160 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 AC098657.3-201ENST00000620434 263 ntBASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NPC1L1Q9UHC9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 RNU6-297P-201ENST00000384636 107 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 RNU4-62P-201ENST00000410125 130 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 RNU6-248P-201ENST00000410720 107 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 RN7SKP142-201ENST00000411236 328 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 RNU6-195P-201ENST00000411352 109 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 CYCSP48-201ENST00000417124 323 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AL353621.1-201ENST00000418219 243 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 EIF4EP4-201ENST00000424916 578 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 RPL31P35-201ENST00000431058 377 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AL022238.1-201ENST00000442557 355 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 KATNBL1P3-201ENST00000443475 909 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 RN7SL274P-201ENST00000492268 272 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AC091965.2-201ENST00000512324 613 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AC112206.3-201ENST00000514578 389 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 Y_RNA.695-201ENST00000516715 107 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 RNU6-685P-201ENST00000517088 95 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AP005902.1-201ENST00000521358 186 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AC105245.1-201ENST00000581934 244 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AC012493.3-201ENST00000604494 112 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AL121992.2-201ENST00000606262 256 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AC006566.1-201ENST00000608943 513 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AL158063.1-201ENST00000615349 536 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 AC138627.2-201ENST00000624202 601 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 SCARNA4-202ENST00000625402 129 ntBASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
NPC1L1Q9UHC9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 RNU6-1179P-201ENST00000384667 107 ntBASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 AC097463.2-201ENST00000421074 142 ntBASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 AC133104.1-201ENST00000429100 218 ntBASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 AC004383.1-201ENST00000438135 289 ntBASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 AC244505.5-201ENST00000443639 207 ntBASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 RNU6-1220P-201ENST00000517126 108 ntBASIC2.3□□□□□ -2.04
NPC1L1Q9UHC9 AP004607.1-201ENST00000524456 203 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms