Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 SUMO2P5-201ENST00000506790 245 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 AC108078.1-201ENST00000508073 725 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 AC113347.3-201ENST00000509113 148 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 AC008837.2-201ENST00000513076 418 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 MTCO3P27-201ENST00000514397 196 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 RNA5SP458-201ENST00000516188 119 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 AC087894.1-201ENST00000538359 518 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 MIR4769-201ENST00000584126 77 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 AC022022.2-201ENST00000602989 360 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 AC022893.3-201ENST00000607665 437 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 AL158163.2-201ENST00000619110 700 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 AL589994.2-201ENST00000621124 579 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 AC120349.3-201ENST00000624377 529 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 MTND5P9-201ENST00000503854 1755 ntBASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 AC100821.1-201ENST00000523153 2479 ntBASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 SNORA75B-201ENST00000384053 137 ntBASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 SNORA70.7-201ENST00000384159 133 ntBASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 SNORD116-20-201ENST00000384529 92 ntBASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 RNU6-296P-201ENST00000384608 107 ntBASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 RPL21P111-201ENST00000418453 477 ntBASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 AL022238.1-201ENST00000442557 355 ntBASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 RNU6-677P-201ENST00000516914 101 ntBASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 AP000907.2-201ENST00000530827 353 ntBASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 MIR5094-201ENST00000578766 85 ntBASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 snoU13.31-201ENST00000607291 104 ntBASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 AL365204.3-201ENST00000612448 685 ntBASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 AC063943.3-201ENST00000615562 356 ntBASIC0.93□□□□□ -2.26
VPS29Q9UBQ0 RNU6-621P-201ENST00000364752 109 ntBASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 RNU6-53P-201ENST00000365367 106 ntBASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 RNU6-72P-201ENST00000384285 79 ntBASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 RN7SKP266-201ENST00000410232 287 ntBASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 CST2P1-201ENST00000425770 87 ntBASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 USP9YP11-201ENST00000427537 717 ntBASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 Z82205.1-201ENST00000428456 297 ntBASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 AL365400.1-201ENST00000431854 640 ntBASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 AC092473.1-201ENST00000441098 221 ntBASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 DYNLT3P2-201ENST00000442517 295 ntBASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 AC080078.3-201ENST00000605407 463 ntBASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 AP000654.2-201ENST00000605633 586 ntBASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 AC245297.2-201ENST00000610119 565 ntBASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 AC091895.1-201ENST00000624494 256 ntBASIC0.92□□□□□ -2.26
VPS29Q9UBQ0 Y_RNA.311-201ENST00000365068 96 ntBASIC0.91□□□□□ -2.26
VPS29Q9UBQ0 MRPL35P1-201ENST00000404272 572 ntBASIC0.91□□□□□ -2.26
VPS29Q9UBQ0 AL357139.1-201ENST00000407792 426 ntBASIC0.91□□□□□ -2.26
VPS29Q9UBQ0 RNA5SP390-201ENST00000410191 113 ntBASIC0.91□□□□□ -2.26
VPS29Q9UBQ0 USP9YP33-201ENST00000412220 421 ntBASIC0.91□□□□□ -2.26
VPS29Q9UBQ0 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.91□□□□□ -2.26
VPS29Q9UBQ0 KATNBL1P3-201ENST00000443475 909 ntBASIC0.91□□□□□ -2.26
VPS29Q9UBQ0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
VPS29Q9UBQ0 AL139824.2-201ENST00000458731 1095 ntBASIC0.91□□□□□ -2.26
VPS29Q9UBQ0 snoU109.2-201ENST00000459316 135 ntBASIC0.91□□□□□ -2.26
VPS29Q9UBQ0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.91□□□□□ -2.26
VPS29Q9UBQ0 AC130324.3-201ENST00000614165 542 ntBASIC0.91□□□□□ -2.26
VPS29Q9UBQ0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.91□□□□□ -2.26
VPS29Q9UBQ0 LINC02555-201ENST00000563933 1951 ntBASIC0.9□□□□□ -2.26
VPS29Q9UBQ0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.26
VPS29Q9UBQ0 RNU6-26P-201ENST00000383985 107 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 MIR1305-201ENST00000408300 86 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 Y_RNA.623-201ENST00000411128 95 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 AL590556.1-201ENST00000423231 483 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 AC013262.1-201ENST00000426710 252 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 CALM1P1-201ENST00000442082 433 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 RPL9P9-202ENST00000466501 579 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 AC009646.1-201ENST00000510455 318 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 CYP3A52P-201ENST00000563326 91 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 BNIP3P26-201ENST00000600827 554 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 MTATP6P2-201ENST00000603319 678 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 HSPE1P19-201ENST00000603327 295 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 AC004492.1-201ENST00000607036 742 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 AL512506.1-201ENST00000613918 449 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 AC007792.1-201ENST00000623023 402 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms