Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RNU2-1-201ENST00000618664 191 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 U2.6-201ENST00000619225 191 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 U2.5-201ENST00000619465 191 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 U2.10-201ENST00000620268 191 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 AC093648.1-201ENST00000623546 606 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 RNU5E-5P-201ENST00000365379 116 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 RNU6-546P-201ENST00000383991 107 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 RNU6-611P-201ENST00000384276 104 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 SNORA8-201ENST00000384574 139 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 Y_RNA.560-201ENST00000384689 102 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 MIR583-201ENST00000384846 75 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 MIR29C-201ENST00000385231 88 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 U8.13-201ENST00000390842 128 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 POLHP1-201ENST00000411806 470 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AL445685.2-201ENST00000422551 342 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 USP9YP18-201ENST00000425912 695 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 RPL7P54-201ENST00000438336 674 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AL360271.2-201ENST00000447710 161 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AC104058.1-201ENST00000448028 297 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 HMGN2P23-201ENST00000456759 269 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AC022878.1-201ENST00000530684 149 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 BNIP3P6-201ENST00000549284 499 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AC007375.1-201ENST00000554513 578 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AC090616.2-202ENST00000584248 222 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AL078605.1-201ENST00000603529 500 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AC112191.3-201ENST00000604371 277 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AL451064.1-201ENST00000607718 471 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 Z82243.1-201ENST00000609432 473 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AL360219.1-201ENST00000610230 366 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AL132822.1-201ENST00000617063 513 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AL157786.1-207ENST00000627771 695 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 AC099654.13-201ENST00000639774 207 ntBASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KLHL28Q9NXS3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 Y_RNA.22-201ENST00000362492 102 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 RNU6-371P-201ENST00000364283 108 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 RNU6-641P-201ENST00000384006 107 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 RPL23AP32-201ENST00000395315 459 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 RPS3AP36-201ENST00000398190 775 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 MIR1283-2-201ENST00000408621 87 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 EEF1A1P40-201ENST00000412883 573 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 VN1R36P-201ENST00000414936 291 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 USP9YP12-201ENST00000450481 570 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 AL133217.1-201ENST00000450980 425 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 AC117532.1-201ENST00000514638 323 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 Y_RNA.672-201ENST00000516289 104 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 RNU6-232P-201ENST00000517144 64 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 AC022616.8-201ENST00000533569 253 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 AC008521.1-201ENST00000587471 187 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 AL022161.1-201ENST00000604390 213 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 AL670379.2-201ENST00000604983 252 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 AL670379.4-201ENST00000605279 254 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 AC108479.2-201ENST00000617314 601 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 AC079248.2-201ENST00000623779 326 ntBASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
KLHL28Q9NXS3 ZNF355P-201ENST00000427301 3216 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 RNU6-553P-201ENST00000364047 96 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 SNORA16.1-201ENST00000364597 132 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 RNU6-61P-201ENST00000365528 109 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 SNORA40.18-201ENST00000391200 128 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 MIR1262-201ENST00000408276 93 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 RNU2-20P-201ENST00000410425 191 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 PGBD4P6-201ENST00000421501 610 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 MTCYBP5-201ENST00000423752 1135 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 AL356583.2-201ENST00000426536 280 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 HSPE1P21-201ENST00000438283 308 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 ART2BP-201ENST00000453501 499 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 PRELID3BP1-201ENST00000457142 540 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 BZW1P2-201ENST00000473537 826 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 RBBP4P6-201ENST00000508098 202 ntBASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.74□□□□□ -2.13
KLHL28Q9NXS3 GNAI2P1-201ENST00000541815 315 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms