Protein–RNA interactions for Protein: Q9NS15

LTBP3, Latent-transforming growth factor beta-binding protein 3, humanhuman

Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3Q9NS15 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.12□□□□□ -1.75
LTBP3Q9NS15 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
LTBP3Q9NS15 SNORD50.1-201ENST00000362987 71 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 Y_RNA.106-201ENST00000363189 100 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 SNORA5B-201ENST00000363786 132 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 RNU4-50P-201ENST00000364361 141 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 Y_RNA.396-201ENST00000383949 103 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 MIR628-201ENST00000385229 95 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 NDUFS5P4-201ENST00000412983 318 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.12□□□□□ -1.75
LTBP3Q9NS15 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.12□□□□□ -1.75
LTBP3Q9NS15 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.12□□□□□ -1.75
LTBP3Q9NS15 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.12□□□□□ -1.75
LTBP3Q9NS15 RPS29P27-201ENST00000463711 170 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.12□□□□□ -1.75
LTBP3Q9NS15 RPS4XP13-201ENST00000483219 789 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 RNU6-408P-201ENST00000515910 100 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 SNORA31.18-201ENST00000517043 134 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 NACAP3-201ENST00000552100 481 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 RPS29P30-201ENST00000600975 111 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.12□□□□□ -1.75
LTBP3Q9NS15 MIR1244-1-201ENST00000612829 85 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.12□□□□□ -1.75
LTBP3Q9NS15 AC243829.7-201ENST00000633081 225 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 MIR1244-3-201ENST00000635744 85 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 MIR1244-2-201ENST00000636449 85 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 MIR1244-4-202ENST00000636813 85 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.12□□□□□ -1.75
LTBP3Q9NS15 OTUD4P1-201ENST00000237841 3067 ntBASIC4.12□□□□□ -1.75
LTBP3Q9NS15 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LTBP3Q9NS15 AC068254.2-201ENST00000623938 3577 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 CUL1P1-201ENST00000509510 2425 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 Y_RNA.117-201ENST00000363294 101 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 RNU6-527P-201ENST00000363425 104 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 U3.6-201ENST00000363622 211 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 Y_RNA.276-201ENST00000364732 109 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 FTH1P6-201ENST00000430768 320 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 CHEK2P4-201ENST00000450340 246 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 RPL23AP49-201ENST00000492925 468 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 SNORA43.2-201ENST00000516652 128 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 AC022080.3-201ENST00000544433 482 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 H3F3AP1-201ENST00000559984 334 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 MIR3945-201ENST00000581853 98 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 RNVU1-4-201ENST00000612985 164 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 AL110115.1-201ENST00000614396 364 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 AC141273.2-201ENST00000618989 130 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 AC090617.7-201ENST00000623952 126 ntBASIC4.11□□□□□ -1.75
LTBP3Q9NS15 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.11□□□□□ -1.75
LTBP3Q9NS15 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LTBP3Q9NS15 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.1□□□□□ -1.75
LTBP3Q9NS15 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LTBP3Q9NS15 RNU6-874P-201ENST00000362390 105 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 RNU6-105P-201ENST00000363909 104 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 RNA5SP42-201ENST00000364278 115 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 RNU6-713P-201ENST00000384761 107 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 MTCO2P33-201ENST00000402100 465 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 AP000275.1-201ENST00000411943 390 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 AL591043.1-201ENST00000432461 424 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 RPS6P12-201ENST00000432491 726 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 AC079354.2-201ENST00000453523 154 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 AC133473.1-201ENST00000455173 299 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 RNU7-169P-201ENST00000459456 61 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.1□□□□□ -1.75
LTBP3Q9NS15 RNU2-53P-201ENST00000516257 147 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 Y_RNA.680-201ENST00000516441 93 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.1□□□□□ -1.75
LTBP3Q9NS15 MIR3162-201ENST00000581818 82 ntBASIC4.1□□□□□ -1.75
LTBP3Q9NS15 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.1□□□□□ -1.75
LTBP3Q9NS15 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.1□□□□□ -1.75
LTBP3Q9NS15 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
LTBP3Q9NS15 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LTBP3Q9NS15 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
LTBP3Q9NS15 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LTBP3Q9NS15 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LTBP3Q9NS15 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.09□□□□□ -1.75
LTBP3Q9NS15 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LTBP3Q9NS15 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
LTBP3Q9NS15 MAPK10-253ENST00000641010 4072 ntBASIC4.09□□□□□ -1.75
LTBP3Q9NS15 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LTBP3Q9NS15 RNA5SP197-201ENST00000363357 119 ntBASIC4.09□□□□□ -1.75
LTBP3Q9NS15 Y_RNA.210-201ENST00000364161 110 ntBASIC4.09□□□□□ -1.75
LTBP3Q9NS15 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LTBP3Q9NS15 RNU6-1035P-201ENST00000384477 107 ntBASIC4.09□□□□□ -1.75
LTBP3Q9NS15 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms