Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AC091390.1-201ENST00000433904 331 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 MTCYBP39-201ENST00000437562 491 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 PGBD4P5-201ENST00000445958 426 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 MTCO3P28-201ENST00000513351 515 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 RNU6-276P-201ENST00000516114 96 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 RNA5SP481-201ENST00000516814 122 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 RNU1-45P-201ENST00000517191 141 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AC092451.2-201ENST00000538746 658 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AC084364.2-201ENST00000546924 395 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AC009063.1-201ENST00000563342 702 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 SNORD53B-201ENST00000577887 78 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 MIR3664-201ENST00000579074 99 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 MIR3118-1-201ENST00000581787 76 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 VN1R80P-201ENST00000597126 338 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AC013244.2-201ENST00000603396 103 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AL590229.1-201ENST00000603497 542 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AL034555.1-201ENST00000604816 211 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AC013244.3-201ENST00000605614 388 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AL451064.1-201ENST00000607718 471 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 U2.15-201ENST00000611544 191 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 U2.16-201ENST00000613119 191 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 U2.12-201ENST00000613778 191 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 U2.20-201ENST00000613956 192 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 U2.9-201ENST00000615427 191 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 U2.11-201ENST00000616345 191 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 U2.2-201ENST00000616535 191 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 RMST_4.1-201ENST00000616886 107 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 U2.3-201ENST00000617785 191 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 U2.19-201ENST00000618602 191 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 RNU2-1-201ENST00000618664 191 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 U2.6-201ENST00000619225 191 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 U2.5-201ENST00000619465 191 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 U2.10-201ENST00000620268 191 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AC084768.2-201ENST00000622736 221 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AC099654.5-201ENST00000636479 350 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AC103706.2-201ENST00000638080 240 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 RNU6-862P-201ENST00000362804 105 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 RNU6-1019P-201ENST00000364424 107 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 SNORA25-201ENST00000384384 134 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 RNU6-1065P-201ENST00000384513 106 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 MIR544A-201ENST00000384855 91 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 SNORA67.6-201ENST00000391093 99 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 RSL24D1P4-201ENST00000400938 484 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AL356776.1-201ENST00000406574 447 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 MTCYBP2-201ENST00000407745 171 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 Y_RNA.625-201ENST00000411256 107 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AL606490.4-201ENST00000423117 127 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 CALM2P2-201ENST00000428512 440 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AL356320.1-201ENST00000429616 163 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 MTND5P2-201ENST00000442927 1142 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AL358794.1-201ENST00000445689 381 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 MTND1P12-201ENST00000455231 147 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AL049829.1-201ENST00000465411 156 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 RPL38P4-201ENST00000502376 214 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AC022447.4-201ENST00000504053 364 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AC079140.3-201ENST00000511111 550 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 ACA64.5-201ENST00000516207 127 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 RNU5A-4P-201ENST00000516588 111 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 SNORD60.2-201ENST00000516883 86 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AC115990.1-201ENST00000526957 301 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AC015720.1-201ENST00000565251 277 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AC008752.3-201ENST00000588113 712 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AC211469.2-201ENST00000605461 205 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 MIR3976-201ENST00000606807 139 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AC080013.3-201ENST00000606839 578 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 AC012409.4-201ENST00000612923 249 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms