Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
VAT1LQ9HCJ6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 Y_RNA.367-201ENST00000365544 101 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 RNU6-116P-201ENST00000384042 109 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 SNORA51.11-201ENST00000384442 131 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 MTND3P17-201ENST00000416968 344 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 HMGB1P31-201ENST00000437242 427 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 AC079781.2-201ENST00000446424 169 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 SNRPGP9-201ENST00000456025 225 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 Y_RNA.638-201ENST00000459374 113 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 SNORD42A-201ENST00000459584 64 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 AC055731.1-201ENST00000474387 401 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 AC018868.1-201ENST00000491307 315 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 OR5AL2P-201ENST00000532185 920 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 AC022202.1-201ENST00000613515 211 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 AC009090.3-201ENST00000616553 565 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 AC091931.1-201ENST00000623488 728 ntBASIC2.09□□□□□ -2.07
VAT1LQ9HCJ6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
VAT1LQ9HCJ6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 FGF7P2-201ENST00000332473 296 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 RNU6-529P-201ENST00000363383 104 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 Y_RNA.169-201ENST00000363745 96 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 RNA5SP213-201ENST00000391031 106 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 RAP1BP3-201ENST00000407180 549 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 MIR1294-201ENST00000408503 142 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 OR6C66P-201ENST00000414917 930 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 AC074117.2-201ENST00000417130 397 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 AL645568.3-201ENST00000433683 316 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 GPR143P-201ENST00000434155 205 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 AC010486.2-201ENST00000505572 483 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 MTND3P25-201ENST00000509243 135 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 AC107393.1-201ENST00000512403 346 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 RNA5SP137-201ENST00000516833 135 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 AP003072.2-201ENST00000527756 676 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 IMMP1LP2-201ENST00000552954 492 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 AC233702.2-202ENST00000562547 291 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 AC090897.2-201ENST00000581715 130 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 AC073539.2-201ENST00000597113 165 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 MIR98-201ENST00000606724 119 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 AC063944.3-201ENST00000609969 533 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 RMST_4.1-201ENST00000616886 107 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 AC026585.1-201ENST00000619582 524 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 U6.114-201ENST00000636407 96 ntBASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
VAT1LQ9HCJ6 SNORA62.1-201ENST00000364287 154 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 RNU6-74P-201ENST00000384235 107 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 RNU6-297P-201ENST00000384636 107 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 RNY3P10-201ENST00000384764 102 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 U3.40-201ENST00000408706 208 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 RNA5SP390-201ENST00000410191 113 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 RNU2-23P-201ENST00000410545 195 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 MTND2P18-201ENST00000419962 1030 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 RPL31P35-201ENST00000431058 377 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 IPO7P1-201ENST00000442031 636 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 AC107032.1-201ENST00000485945 480 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 MTCO3P9-201ENST00000506989 781 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 RNU2-19P-201ENST00000517288 84 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 AC034114.1-201ENST00000520293 285 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 AC145350.1-201ENST00000567426 208 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 AC012414.6-201ENST00000568241 401 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 MIR4419B-201ENST00000577260 68 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 MIR4529-201ENST00000578110 78 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 AL031601.2-202ENST00000622650 282 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 AC011155.2-201ENST00000623202 216 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 MTND4P1-201ENST00000457501 1466 ntBASIC2.07□□□□□ -2.08
VAT1LQ9HCJ6 RNU6-655P-201ENST00000362858 107 ntBASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 RNU6-108P-201ENST00000365558 107 ntBASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 HMGB3P2-201ENST00000411913 584 ntBASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 HMGN2P38-201ENST00000423806 265 ntBASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 RNA5SP269-201ENST00000459032 137 ntBASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 AL121594.1-201ENST00000475906 575 ntBASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 SNORA18.6-201ENST00000516792 115 ntBASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 AC107953.1-201ENST00000522216 297 ntBASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 AC007229.1-201ENST00000590455 412 ntBASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 AL031274.2-201ENST00000599419 203 ntBASIC2.06□□□□□ -2.08
VAT1LQ9HCJ6 AC064872.1-201ENST00000604823 1072 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms