Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 SNORA3A-201ENST00000364113 130 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 RNU6-1322P-201ENST00000364309 107 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 U3.13-201ENST00000364804 214 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 Y_RNA.481-201ENST00000384373 102 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 RNU1-148P-201ENST00000384472 162 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 MTCO3P40-201ENST00000392516 676 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 AC016907.1-201ENST00000419483 435 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 AL122001.1-201ENST00000457027 370 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 snoU13.14-201ENST00000459372 104 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 SRIP1-201ENST00000489235 288 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 RPL9P6-201ENST00000492764 598 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 MTND2P33-201ENST00000506452 1031 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 AC096725.1-201ENST00000514266 313 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 SNORA48.11-201ENST00000517015 89 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 RNA5SP402-201ENST00000517148 110 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 AC104383.1-201ENST00000530297 370 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 IMMP1LP2-201ENST00000552954 492 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 MIR5092-201ENST00000583139 88 ntBASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC68Q9H2F9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 RNU6-859P-201ENST00000362728 107 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 RNU6-428P-201ENST00000362942 107 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 RNU6-1085P-201ENST00000363576 107 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 RNU4-24P-201ENST00000364565 139 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 CBX3P9-201ENST00000402326 552 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 RNU6-293P-201ENST00000411259 106 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 RPLP0P7-201ENST00000416050 667 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 VN1R108P-201ENST00000431580 830 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 AC107083.1-201ENST00000439643 279 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 AC011816.1-201ENST00000441346 546 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 IFNA11P-201ENST00000446352 526 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 RNA5SP401-201ENST00000515920 127 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 AC118273.2-201ENST00000532092 465 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 CYCSP26-201ENST00000534107 320 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 AC079600.2-201ENST00000550076 130 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 MIR3126-201ENST00000577443 74 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 AC107304.1-201ENST00000604229 296 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 HULC.1-201ENST00000612720 240 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 AC068792.1-201ENST00000621354 417 ntBASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC68Q9H2F9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
CCDC68Q9H2F9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC68Q9H2F9 AL355596.1-201ENST00000565399 3996 ntBASIC2.58□□□□□ -2
CCDC68Q9H2F9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC68Q9H2F9 SNORD62.1-201ENST00000362541 86 ntBASIC2.58□□□□□ -2
CCDC68Q9H2F9 Y_RNA.436-201ENST00000384097 102 ntBASIC2.58□□□□□ -2
CCDC68Q9H2F9 RNA5SP219-201ENST00000390940 113 ntBASIC2.58□□□□□ -2
CCDC68Q9H2F9 AL591034.2-201ENST00000402839 359 ntBASIC2.58□□□□□ -2
CCDC68Q9H2F9 AC096664.2-201ENST00000411843 406 ntBASIC2.58□□□□□ -2
CCDC68Q9H2F9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.58□□□□□ -2
CCDC68Q9H2F9 USP9YP20-201ENST00000419224 558 ntBASIC2.58□□□□□ -2
CCDC68Q9H2F9 COTL1P1-201ENST00000422309 375 ntBASIC2.58□□□□□ -2
CCDC68Q9H2F9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.58□□□□□ -2
CCDC68Q9H2F9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.58□□□□□ -2
CCDC68Q9H2F9 RNU6-261P-201ENST00000459506 102 ntBASIC2.58□□□□□ -2
CCDC68Q9H2F9 AC083798.1-201ENST00000472671 131 ntBASIC2.58□□□□□ -2
CCDC68Q9H2F9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.58□□□□□ -2
CCDC68Q9H2F9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.58□□□□□ -2
CCDC68Q9H2F9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.58□□□□□ -2
CCDC68Q9H2F9 RNU6-85P-201ENST00000605989 107 ntBASIC2.58□□□□□ -2
CCDC68Q9H2F9 AC245884.12-201ENST00000615364 59 ntBASIC2.58□□□□□ -2
CCDC68Q9H2F9 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.58□□□□□ -2
CCDC68Q9H2F9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.58□□□□□ -2
CCDC68Q9H2F9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.57□□□□□ -2
CCDC68Q9H2F9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.57□□□□□ -2
CCDC68Q9H2F9 RNU1-23P-201ENST00000363361 144 ntBASIC2.57□□□□□ -2
CCDC68Q9H2F9 RNU6-336P-201ENST00000364891 107 ntBASIC2.57□□□□□ -2
CCDC68Q9H2F9 SNORA69-201ENST00000383895 132 ntBASIC2.57□□□□□ -2
CCDC68Q9H2F9 SNORA6-201ENST00000384033 151 ntBASIC2.57□□□□□ -2
CCDC68Q9H2F9 RNU6-1222P-201ENST00000384615 107 ntBASIC2.57□□□□□ -2
CCDC68Q9H2F9 SNORA80E-201ENST00000384744 137 ntBASIC2.57□□□□□ -2
CCDC68Q9H2F9 AL360182.1-201ENST00000397433 468 ntBASIC2.57□□□□□ -2
CCDC68Q9H2F9 AL356057.3-201ENST00000402607 340 ntBASIC2.57□□□□□ -2
CCDC68Q9H2F9 AF274854.1-201ENST00000413236 615 ntBASIC2.57□□□□□ -2
CCDC68Q9H2F9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.57□□□□□ -2
CCDC68Q9H2F9 MORF4L1P6-201ENST00000418771 268 ntBASIC2.57□□□□□ -2
CCDC68Q9H2F9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.57□□□□□ -2
CCDC68Q9H2F9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.57□□□□□ -2
CCDC68Q9H2F9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.57□□□□□ -2
CCDC68Q9H2F9 MTCO3P38-201ENST00000468910 766 ntBASIC2.57□□□□□ -2
CCDC68Q9H2F9 RPL30P1-201ENST00000488676 339 ntBASIC2.57□□□□□ -2
CCDC68Q9H2F9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.57□□□□□ -2
CCDC68Q9H2F9 CCDC34P1-201ENST00000507441 517 ntBASIC2.57□□□□□ -2
CCDC68Q9H2F9 AK3P2-201ENST00000507976 429 ntBASIC2.57□□□□□ -2
CCDC68Q9H2F9 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.57□□□□□ -2
CCDC68Q9H2F9 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms