Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 MIR487A-201ENST00000385009 80 ntBASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 SNORD66.1-201ENST00000391230 76 ntBASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 AL138878.1-201ENST00000405131 347 ntBASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 AC016397.1-201ENST00000412463 242 ntBASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 PTGES3P4-201ENST00000426243 356 ntBASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 RPL21P126-201ENST00000470049 478 ntBASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 RN7SL585P-201ENST00000470538 280 ntBASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 AC107016.1-201ENST00000550463 337 ntBASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 AP005019.3-201ENST00000620418 560 ntBASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 AC048347.1-201ENST00000624621 427 ntBASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 SCARNA4-202ENST00000625402 129 ntBASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 AL136964.1-201ENST00000622038 2990 ntBASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 AC016588.2-201ENST00000632484 3021 ntBASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUCKS1Q9H1E3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 AC126755.2-208ENST00000327792 462 ntBASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 AC138969.1-213ENST00000331436 462 ntBASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 RNU6-527P-201ENST00000363425 104 ntBASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 U3.22-201ENST00000391120 215 ntBASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 MIR513C-201ENST00000401352 84 ntBASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 AC108145.1-201ENST00000503770 153 ntBASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 SCARNA15.2-201ENST00000516409 127 ntBASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 RNU6-58P-201ENST00000517143 103 ntBASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 RNA5SP170-201ENST00000517150 101 ntBASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 AL021997.2-201ENST00000615674 271 ntBASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 AC099669.2-201ENST00000616549 437 ntBASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 AC092628.2-201ENST00000622492 339 ntBASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 AC027309.3-201ENST00000623419 351 ntBASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
NUCKS1Q9H1E3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 RNU5B-2P-201ENST00000363036 113 ntBASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 RNU6-1255P-201ENST00000363434 112 ntBASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 RNA5SP447-201ENST00000363749 119 ntBASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 RNA5SP175-201ENST00000364275 119 ntBASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 EBAG9P1-201ENST00000418955 543 ntBASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 AL732292.1-201ENST00000426692 226 ntBASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 Y_RNA.797-201ENST00000515977 94 ntBASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 AC006064.5-201ENST00000541782 248 ntBASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 MIR378J-201ENST00000611988 109 ntBASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 AC010300.1-201ENST00000600671 5134 ntBASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 AC110491.1-201ENST00000562191 2010 ntBASIC4.67□□□□□ -1.66
NUCKS1Q9H1E3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 RNU6-137P-201ENST00000363680 108 ntBASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 RNU6-1056P-201ENST00000383996 107 ntBASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 RPL18P10-201ENST00000425606 538 ntBASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 RPL35AP15-201ENST00000468042 339 ntBASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 RN7SL481P-201ENST00000477764 299 ntBASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 CYCTP-201ENST00000504253 315 ntBASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 SNORA70.14-201ENST00000516205 110 ntBASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 RNU6-1256P-201ENST00000516539 103 ntBASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms