Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
DDX47Q9H0S4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
DDX47Q9H0S4 RNU6-212P-201ENST00000362642 104 ntBASIC2.14□□□□□ -2.07
DDX47Q9H0S4 RNU6-1210P-201ENST00000363775 107 ntBASIC2.14□□□□□ -2.07
DDX47Q9H0S4 RNU6-1303P-201ENST00000364841 107 ntBASIC2.14□□□□□ -2.07
DDX47Q9H0S4 U3.40-201ENST00000408706 208 ntBASIC2.14□□□□□ -2.07
DDX47Q9H0S4 RNA5SP508-201ENST00000411327 119 ntBASIC2.14□□□□□ -2.07
DDX47Q9H0S4 AC132479.1-201ENST00000449160 144 ntBASIC2.14□□□□□ -2.07
DDX47Q9H0S4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.14□□□□□ -2.07
DDX47Q9H0S4 AC092436.1-201ENST00000506450 503 ntBASIC2.14□□□□□ -2.07
DDX47Q9H0S4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.14□□□□□ -2.07
DDX47Q9H0S4 AC034114.1-201ENST00000520293 285 ntBASIC2.14□□□□□ -2.07
DDX47Q9H0S4 AL512310.1-201ENST00000548639 172 ntBASIC2.14□□□□□ -2.07
DDX47Q9H0S4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.14□□□□□ -2.07
DDX47Q9H0S4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.14□□□□□ -2.07
DDX47Q9H0S4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.14□□□□□ -2.07
DDX47Q9H0S4 APOOP1-201ENST00000604695 592 ntBASIC2.14□□□□□ -2.07
DDX47Q9H0S4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
DDX47Q9H0S4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.14□□□□□ -2.07
DDX47Q9H0S4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.14□□□□□ -2.07
DDX47Q9H0S4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.13□□□□□ -2.07
DDX47Q9H0S4 Y_RNA.324-201ENST00000365165 102 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 RNU6-1274P-201ENST00000384557 107 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 RNU2-40P-201ENST00000410833 196 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 BTF3L4P1-201ENST00000413813 468 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 MTCO2P11-201ENST00000431069 680 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.13□□□□□ -2.07
DDX47Q9H0S4 MTND4P32-201ENST00000437189 1237 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 AC007969.2-201ENST00000441891 191 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.13□□□□□ -2.07
DDX47Q9H0S4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.13□□□□□ -2.07
DDX47Q9H0S4 AC055731.1-201ENST00000474387 401 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 RPL30P12-201ENST00000474666 353 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.13□□□□□ -2.07
DDX47Q9H0S4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.13□□□□□ -2.07
DDX47Q9H0S4 ARL2BPP4-201ENST00000506854 471 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 AC008413.1-201ENST00000511864 177 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 RNA5SP137-201ENST00000516833 135 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.13□□□□□ -2.07
DDX47Q9H0S4 SUB1P2-201ENST00000556401 297 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.13□□□□□ -2.07
DDX47Q9H0S4 MIR4528-201ENST00000577763 90 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 AC068790.2-201ENST00000602601 557 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 ELOCP5-201ENST00000604924 333 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 AC087752.4-201ENST00000605911 462 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 AL590808.1-201ENST00000618696 141 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 uc_338.11-201ENST00000619132 160 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 AL159153.1-201ENST00000619688 317 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 AC090517.3-201ENST00000625170 141 ntBASIC2.13□□□□□ -2.07
DDX47Q9H0S4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
DDX47Q9H0S4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
DDX47Q9H0S4 AC002543.1-201ENST00000299783 1954 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
DDX47Q9H0S4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
DDX47Q9H0S4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
DDX47Q9H0S4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
DDX47Q9H0S4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
DDX47Q9H0S4 RNU6-606P-201ENST00000384721 111 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 AF228730.1-201ENST00000397972 663 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 CBX3P9-201ENST00000402326 552 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 RNU2-9P-201ENST00000410194 145 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 AL139156.1-201ENST00000412785 841 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 MTCO2P34-201ENST00000421994 607 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 AC027124.2-201ENST00000428249 105 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.12□□□□□ -2.07
DDX47Q9H0S4 MTND1P18-201ENST00000448191 573 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 AC006512.1-201ENST00000468816 291 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 RNA5SP364-201ENST00000516938 78 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 MTCO2P4-201ENST00000517968 247 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 AC107953.1-201ENST00000522216 297 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.12□□□□□ -2.07
DDX47Q9H0S4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.12□□□□□ -2.07
DDX47Q9H0S4 MIR3935-201ENST00000583472 104 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 AC025449.1-201ENST00000603896 529 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 AC136475.10-201ENST00000620253 385 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 uc_338.20-201ENST00000621563 178 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 Z69908.1-201ENST00000622603 247 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 AC007792.1-201ENST00000623023 402 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.12□□□□□ -2.07
DDX47Q9H0S4 U4.7-201ENST00000638126 106 ntBASIC2.12□□□□□ -2.07
DDX47Q9H0S4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.11□□□□□ -2.07
DDX47Q9H0S4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
DDX47Q9H0S4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
DDX47Q9H0S4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.11□□□□□ -2.07
DDX47Q9H0S4 SNORA75-201ENST00000384158 137 ntBASIC2.11□□□□□ -2.07
DDX47Q9H0S4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
DDX47Q9H0S4 RNU4-53P-201ENST00000410828 140 ntBASIC2.11□□□□□ -2.07
DDX47Q9H0S4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
DDX47Q9H0S4 AC107032.1-201ENST00000485945 480 ntBASIC2.11□□□□□ -2.07
DDX47Q9H0S4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.11□□□□□ -2.07
DDX47Q9H0S4 RNU2-19P-201ENST00000517288 84 ntBASIC2.11□□□□□ -2.07
DDX47Q9H0S4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.11□□□□□ -2.07
DDX47Q9H0S4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.11□□□□□ -2.07
DDX47Q9H0S4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.11□□□□□ -2.07
DDX47Q9H0S4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.11□□□□□ -2.07
DDX47Q9H0S4 AL391840.1-201ENST00000571144 367 ntBASIC2.11□□□□□ -2.07
DDX47Q9H0S4 AL031274.2-201ENST00000599419 203 ntBASIC2.11□□□□□ -2.07
DDX47Q9H0S4 AC098657.3-201ENST00000620434 263 ntBASIC2.11□□□□□ -2.07
DDX47Q9H0S4 AC097372.5-201ENST00000623665 376 ntBASIC2.11□□□□□ -2.07
DDX47Q9H0S4 MIR3974-201ENST00000637126 96 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms