Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 Y_RNA.364-201ENST00000365532 101 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 MIR218-2-201ENST00000385006 110 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 RNU6-750P-201ENST00000390946 107 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 RNU1-101P-201ENST00000391171 127 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 RNU6-1156P-201ENST00000410365 100 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 MTND2P23-201ENST00000422990 651 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 YME1L1P1-201ENST00000429435 297 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AL160004.2-201ENST00000432935 350 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 RN7SL293P-201ENST00000481765 281 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 RNU6-1045P-201ENST00000516321 107 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 SNORD59.2-201ENST00000516873 68 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AP006245.1-201ENST00000522549 120 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AC092447.9-201ENST00000603395 144 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AL355877.2-201ENST00000603670 358 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AC091152.3-201ENST00000604227 325 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AL356157.2-201ENST00000605122 111 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AL355802.3-201ENST00000607571 545 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AC007485.1-201ENST00000616755 206 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 RBBP8P1-201ENST00000449447 1844 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 AC073073.2-201ENST00000609827 2578 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 RNU6-595P-201ENST00000363944 107 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 RNY1P14-201ENST00000384426 108 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 RNU6-1160P-201ENST00000384546 104 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 MIR490-201ENST00000384865 128 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 EI24P2-201ENST00000397776 1076 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 RNA5SP390-201ENST00000410191 113 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 EIF1AXP1-201ENST00000419267 435 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 AC007098.1-201ENST00000420122 367 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 AC002075.2-201ENST00000425207 252 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 AC007969.2-201ENST00000441891 191 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 RN7SL330P-201ENST00000469709 307 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 RPS26P21-201ENST00000475397 348 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 AC007375.1-201ENST00000554513 578 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 U4.6-201ENST00000621618 127 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 AP003355.3-201ENST00000623465 114 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 AC233981.2-201ENST00000611524 1614 ntBASIC3.88□□□□□ -1.79
CCDC113Q9H0I3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 Y_RNA.148-201ENST00000363557 117 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 RNU6-142P-201ENST00000384019 107 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 RNU6-1032P-201ENST00000384100 107 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 RNU6-748P-201ENST00000384648 107 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 MIR625-201ENST00000385047 85 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 MTCYBP10-201ENST00000424905 650 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 AC092423.1-201ENST00000430165 186 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 RPS29P31-201ENST00000446147 164 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 AL031659.1-201ENST00000447075 539 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 RN7SL594P-201ENST00000470590 287 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 AC104564.1-201ENST00000493028 407 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 GZMAP1-201ENST00000503054 631 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 AC105758.1-201ENST00000506038 399 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 RNU7-4P-201ENST00000516961 62 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 AC009812.2-201ENST00000517657 457 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 AP000889.1-201ENST00000530968 660 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 AL590705.4-201ENST00000532209 134 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 AC010653.1-201ENST00000571108 881 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 AC069200.1-201ENST00000609511 323 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 RNVU1-4-201ENST00000612985 164 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 U7.8-201ENST00000619968 63 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 MFSD8-233ENST00000641482 4860 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 PWAR6-201ENST00000552334 4618 ntBASIC3.87□□□□□ -1.79
CCDC113Q9H0I3 MTND4P1-201ENST00000457501 1466 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 SNORA63.1-201ENST00000362493 131 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 Y_RNA.39-201ENST00000362620 98 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 RNU1-115P-201ENST00000365329 160 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 RNU6-968P-201ENST00000384076 107 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 SNORD17-201ENST00000390930 237 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms