Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF38Q9H0F5 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RNF38Q9H0F5 MIR208A-201ENST00000362287 71 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.143-201ENST00000363520 106 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.405-201ENST00000383979 100 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.439-201ENST00000384119 94 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.451-201ENST00000384200 100 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.524-201ENST00000384564 100 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 SNORA1.3-201ENST00000384676 136 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.561-201ENST00000384694 100 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 MIR190B-201ENST00000401119 79 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 RNU2-20P-201ENST00000410425 191 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 RNA5SP44-201ENST00000410446 133 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.623-201ENST00000411128 95 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF38Q9H0F5 FABP5P15-201ENST00000453566 214 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.89□□□□□ -1.79
RNF38Q9H0F5 RNU5B-3P-201ENST00000516601 115 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 SCARNA24.2-201ENST00000516968 130 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 AC025755.1-201ENST00000521306 278 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF38Q9H0F5 MIR4300-201ENST00000581016 96 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 SRGNP1-201ENST00000603392 451 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 AP000787.2-201ENST00000604432 568 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 AC006077.1-201ENST00000604746 343 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 AC069200.1-201ENST00000609511 323 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 AC090617.7-201ENST00000623952 126 ntBASIC3.89□□□□□ -1.79
RNF38Q9H0F5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.89□□□□□ -1.79
RNF38Q9H0F5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF38Q9H0F5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF38Q9H0F5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 IPO8P1-201ENST00000455509 3109 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 MIR335-201ENST00000362173 94 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.123-201ENST00000363338 102 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.269-201ENST00000364685 89 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 U3.13-201ENST00000364804 214 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 RNU6-140P-201ENST00000384566 108 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 SNORA12.2-201ENST00000391040 156 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 RPL21P75-201ENST00000396599 483 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 RPL21P28-201ENST00000401418 483 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 AL590556.1-201ENST00000423231 483 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 AC007560.1-201ENST00000426912 237 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 HMGN2P31-201ENST00000432430 273 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 U8.22-201ENST00000459141 133 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 snoU13.22-201ENST00000459428 104 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 RPL21P39-201ENST00000463605 483 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 AC132942.1-201ENST00000486753 483 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 AC093591.1-201ENST00000491435 481 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 AC139453.3-201ENST00000493276 369 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 RPL21P16-201ENST00000495531 483 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.700-201ENST00000516806 100 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 AL442163.3-201ENST00000554110 156 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 AL137849.1-201ENST00000604767 169 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 AL391261.4-201ENST00000616012 481 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 MIR6076-201ENST00000617521 113 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.88□□□□□ -1.79
RNF38Q9H0F5 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RNF38Q9H0F5 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF38Q9H0F5 RNU6-1266P-201ENST00000362794 105 ntBASIC3.87□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.180-201ENST00000363867 113 ntBASIC3.87□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.352-201ENST00000365439 102 ntBASIC3.87□□□□□ -1.79
RNF38Q9H0F5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RNF38Q9H0F5 SNORD115-46-201ENST00000390982 71 ntBASIC3.87□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.602-201ENST00000410535 92 ntBASIC3.87□□□□□ -1.79
RNF38Q9H0F5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.87□□□□□ -1.79
RNF38Q9H0F5 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.87□□□□□ -1.79
RNF38Q9H0F5 SSXP4-201ENST00000451349 245 ntBASIC3.87□□□□□ -1.79
RNF38Q9H0F5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.87□□□□□ -1.79
RNF38Q9H0F5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.87□□□□□ -1.79
RNF38Q9H0F5 RNU6-1338P-201ENST00000516328 91 ntBASIC3.87□□□□□ -1.79
RNF38Q9H0F5 AC091144.1-201ENST00000519573 138 ntBASIC3.87□□□□□ -1.79
RNF38Q9H0F5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.87□□□□□ -1.79
RNF38Q9H0F5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.87□□□□□ -1.79
RNF38Q9H0F5 MIR486-1-201ENST00000612171 68 ntBASIC3.87□□□□□ -1.79
RNF38Q9H0F5 U7.8-201ENST00000619968 63 ntBASIC3.87□□□□□ -1.79
RNF38Q9H0F5 AC118273.1-201ENST00000525324 3006 ntBASIC3.87□□□□□ -1.79
RNF38Q9H0F5 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF38Q9H0F5 OTUD4P1-201ENST00000237841 3067 ntBASIC3.87□□□□□ -1.79
RNF38Q9H0F5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RNF38Q9H0F5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
RNF38Q9H0F5 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms