Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 SNORD14D-201ENST00000384390 87 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 MIR483-201ENST00000385070 76 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 RNA5SP212-201ENST00000391223 107 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AL031577.2-201ENST00000404133 280 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 MIR1294-201ENST00000408503 142 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 RN7SKP32-201ENST00000410167 303 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 RPS3AP3-201ENST00000411933 242 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 CYCSP33-201ENST00000414485 327 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 OR6C66P-201ENST00000414917 930 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 BX510359.4-201ENST00000423750 193 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 MTND5P25-201ENST00000430499 799 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 HMGN2P3-201ENST00000433603 273 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AL645568.3-201ENST00000433683 316 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 HMGN2P5-201ENST00000436882 273 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 MTND1P30-201ENST00000441241 901 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 RPL30P12-201ENST00000474666 353 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AP003072.2-201ENST00000527756 676 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AP002770.2-201ENST00000543613 532 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 ZNF321P-202ENST00000550843 495 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AC087883.1-201ENST00000551882 391 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AC009063.1-201ENST00000563342 702 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 MIR548AB-201ENST00000584917 84 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AC091135.1-201ENST00000585943 307 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 BNIP3P8-201ENST00000597863 560 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AC078795.2-201ENST00000602835 1252 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AC090578.1-201ENST00000604955 591 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AC004908.3-201ENST00000610248 625 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 AL603839.4-201ENST00000624658 1005 ntBASIC1.47□□□□□ -2.17
SLIRPQ9GZT3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 snoU2_19.1-201ENST00000362361 80 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 SNORD115-3-201ENST00000363100 82 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 RNU6-553P-201ENST00000364047 96 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 RNU6-1164P-201ENST00000364428 107 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 RNU5E-7P-201ENST00000365290 117 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 Y_RNA.560-201ENST00000384689 102 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AL356432.1-201ENST00000405809 419 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 C1DP2-201ENST00000418167 426 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AL356320.1-201ENST00000429616 163 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 RPS15AP10-201ENST00000432472 382 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 RNU7-125P-201ENST00000458760 62 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AP001486.1-201ENST00000463339 476 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 FO393415.2-201ENST00000480085 343 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AC104806.1-201ENST00000508720 308 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AC096745.1-201ENST00000509945 370 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 RNU6-232P-201ENST00000517144 64 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AP002453.2-201ENST00000533503 320 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AC022880.1-201ENST00000534017 973 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AC008015.1-201ENST00000555505 465 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AC022254.1-201ENST00000567857 235 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 MIR3682-201ENST00000581338 84 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 Z69720.2-201ENST00000624755 279 ntBASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SLIRPQ9GZT3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 Y_RNA.367-201ENST00000365544 101 ntBASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 MIR9-3-201ENST00000385084 90 ntBASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 EIF4EP2-201ENST00000422816 654 ntBASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 CBX3P6-201ENST00000430257 527 ntBASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 AC009961.2-201ENST00000435771 251 ntBASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 AC003989.2-201ENST00000440224 169 ntBASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 RPL39P29-201ENST00000447779 157 ntBASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 FDX1P2-201ENST00000450769 375 ntBASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 MTCYBP1-201ENST00000454315 1119 ntBASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 AC104136.1-201ENST00000512969 394 ntBASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 RNU6-965P-201ENST00000516721 96 ntBASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SLIRPQ9GZT3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms