Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 AC110491.1-201ENST00000562191 2010 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 RNU4-80P-201ENST00000363200 141 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 SNORA26.3-201ENST00000391119 136 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 SNORD66.1-201ENST00000391230 76 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 RPL21P17-201ENST00000397467 475 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 EI24P2-201ENST00000397776 1076 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 AL512633.1-201ENST00000399931 655 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 AC099548.1-201ENST00000421443 426 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 RPL7AP25-201ENST00000423357 805 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 RPL35AP15-201ENST00000468042 339 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 AC011276.1-201ENST00000469688 323 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 PARP4P3-201ENST00000510265 317 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 ACA59.2-201ENST00000517061 156 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 AC055872.1-201ENST00000570978 278 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 MIR3690-201ENST00000580266 75 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 MIR4308-201ENST00000580634 81 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 AC011266.1-201ENST00000624119 3569 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 RBBP8P1-201ENST00000449447 1844 ntBASIC4.11□□□□□ -1.75
BHLHE41Q9C0J9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 Y_RNA.217-201ENST00000364214 105 ntBASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 RNU4-56P-201ENST00000364700 142 ntBASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 Y_RNA.398-201ENST00000383952 99 ntBASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 RNU6-793P-201ENST00000384233 104 ntBASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 Y_RNA.641-201ENST00000459414 105 ntBASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 AL121594.1-201ENST00000475906 575 ntBASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 RNU6-155P-201ENST00000516347 100 ntBASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 SNORA31.16-201ENST00000516773 139 ntBASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 AC115990.1-201ENST00000526957 301 ntBASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 AC006199.1-201ENST00000548728 219 ntBASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 MIR3145-201ENST00000580727 82 ntBASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 MIR432-201ENST00000606207 94 ntBASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 AC092628.2-201ENST00000622492 339 ntBASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 MIR3199-2-201ENST00000636243 86 ntBASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.1□□□□□ -1.75
BHLHE41Q9C0J9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 AC099654.7-201ENST00000635788 2127 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 RNA5SP175-201ENST00000364275 119 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 RNU6-487P-201ENST00000365430 104 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 SNORD50.2-201ENST00000365465 70 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 RNU6-1081P-201ENST00000384537 107 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 SNORA40.19-201ENST00000390846 128 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 RPL23AP48-201ENST00000406913 488 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 MIR320B2-201ENST00000408479 138 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 RNU6-394P-201ENST00000410735 107 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 BPY2DP-201ENST00000422208 265 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 OOSP1P1-201ENST00000423265 274 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 RAB28P5-201ENST00000427490 651 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 AC005300.1-201ENST00000428401 373 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 HMGB1P37-201ENST00000439613 609 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 snoU13.1-201ENST00000459157 104 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 AC090525.1-201ENST00000479116 478 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 AC006064.5-201ENST00000541782 248 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 AC025884.1-201ENST00000556034 378 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 AC004467.1-201ENST00000615678 330 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 SNX18P1Y-201ENST00000616231 511 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 AC073073.2-201ENST00000609827 2578 ntBASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms