Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 U6.105-201ENST00000637379 88 ntBASIC4.58□□□□□ -1.68
UBE2OQ9C0C9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBE2OQ9C0C9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.58□□□□□ -1.68
UBE2OQ9C0C9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
UBE2OQ9C0C9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 RNU6-626P-201ENST00000363354 107 ntBASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 RNU6-173P-201ENST00000364215 104 ntBASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 RNU6-20P-201ENST00000384106 107 ntBASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 RNU6-417P-201ENST00000384712 107 ntBASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 Y_RNA.568-201ENST00000384742 113 ntBASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 RNA5SP246-201ENST00000458909 119 ntBASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 RPL23AP49-201ENST00000492925 468 ntBASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 RNU4-60P-201ENST00000517239 135 ntBASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 AC241585.2-209ENST00000638217 143 ntBASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 AL365440.1-201ENST00000436135 2167 ntBASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UBE2OQ9C0C9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 RNU6-961P-201ENST00000363893 105 ntBASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 Y_RNA.217-201ENST00000364214 105 ntBASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 RNU6-1175P-201ENST00000365200 107 ntBASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 RNVU1-14-201ENST00000384770 164 ntBASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 AL162725.1-201ENST00000435405 301 ntBASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 AC009237.7-201ENST00000447357 229 ntBASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 SSXP4-201ENST00000451349 245 ntBASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 RPL23AP3-201ENST00000453844 468 ntBASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 Y_RNA.641-201ENST00000459414 105 ntBASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 IGLV3-26-201ENST00000520756 302 ntBASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 AP005660.1-201ENST00000522972 293 ntBASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 U3.45-201ENST00000607547 219 ntBASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 AC007546.2-201ENST00000623996 360 ntBASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 SCARNA4-202ENST00000625402 129 ntBASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UBE2OQ9C0C9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 RNA5SP197-201ENST00000363357 119 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 Y_RNA.230-201ENST00000364348 109 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 Y_RNA.343-201ENST00000365354 112 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 RNU6-629P-201ENST00000384061 103 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 MIR10B-201ENST00000385011 110 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 Y_RNA.597-201ENST00000410463 100 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 AL390729.2-201ENST00000416137 156 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 AC098614.2-201ENST00000426040 255 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 RPS26P28-201ENST00000470806 348 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 RPS29P2-201ENST00000479278 136 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 AC025445.1-201ENST00000502728 300 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 SNORA40.9-201ENST00000515895 93 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 RNA5SP165-201ENST00000517142 115 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 CYCSP30-201ENST00000546447 172 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 RPL23AP97-201ENST00000568955 471 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 AL365222.1-201ENST00000614661 98 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 AC027309.3-201ENST00000623419 351 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 BMS1P21-201ENST00000634565 365 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 AC090971.4-201ENST00000560291 1800 ntBASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.55□□□□□ -1.68
UBE2OQ9C0C9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.54□□□□□ -1.68
UBE2OQ9C0C9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.54□□□□□ -1.68
UBE2OQ9C0C9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.54□□□□□ -1.68
UBE2OQ9C0C9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBE2OQ9C0C9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBE2OQ9C0C9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms