Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC138623.1-201ENST00000418060 216 ntBASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 AL035666.1-201ENST00000446195 348 ntBASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 AC079448.1-201ENST00000449377 373 ntBASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 AC025465.3-201ENST00000510570 311 ntBASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 AP000907.2-201ENST00000530827 353 ntBASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 MTATP6P3-201ENST00000581686 676 ntBASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 MIR4295-201ENST00000585286 85 ntBASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 AP001485.1-201ENST00000604799 199 ntBASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 AC093788.1-201ENST00000609356 927 ntBASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 AC112204.3-201ENST00000623822 332 ntBASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 RNU6-655P-201ENST00000362858 107 ntBASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 Y_RNA.178-201ENST00000363832 102 ntBASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 RNU6-560P-201ENST00000364007 108 ntBASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 Y_RNA.534-201ENST00000384599 112 ntBASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 MIR29B2-201ENST00000385055 81 ntBASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 NEFMP1-201ENST00000443423 1006 ntBASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 PTENP1-201ENST00000447117 1215 ntBASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 ZNF886P-201ENST00000450781 723 ntBASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 RNU6-902P-201ENST00000517212 91 ntBASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 DEFB108A-201ENST00000530110 222 ntBASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 MIR5000-201ENST00000577717 103 ntBASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 MTATP6P2-201ENST00000603319 678 ntBASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
UPF3BQ9BZI7 ICE2P2-201ENST00000483823 2787 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 SNORA18.2-201ENST00000383865 132 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 RNU6-224P-201ENST00000384055 107 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 AC083875.1-201ENST00000419509 405 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 SNRPEP10-201ENST00000420249 274 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 RAC1P6-201ENST00000423911 575 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 AC108059.3-201ENST00000456388 214 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 snoU13.9-201ENST00000458927 103 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 RNU6-1315P-201ENST00000517187 99 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 AC019176.1-201ENST00000518519 225 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 MTND1P36-201ENST00000522384 936 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 BNIP3P27-201ENST00000599991 412 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 AC024060.1-201ENST00000607052 494 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 AC092574.1-201ENST00000609771 420 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
UPF3BQ9BZI7 RNU6-1210P-201ENST00000363775 107 ntBASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 RNU4-41P-201ENST00000364426 143 ntBASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 Y_RNA.311-201ENST00000365068 96 ntBASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 RNU6-622P-201ENST00000384272 103 ntBASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 NCOR1P3-201ENST00000420479 303 ntBASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 AC013262.1-201ENST00000426710 252 ntBASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 MIR1273C-201ENST00000578669 77 ntBASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 AC008507.2-201ENST00000588402 1176 ntBASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 AC174048.1-201ENST00000603389 144 ntBASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 AL360085.1-201ENST00000604713 532 ntBASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 AC123767.1-202ENST00000620407 817 ntBASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 MTND5P42-201ENST00000637720 498 ntBASIC1.29□□□□□ -2.2
UPF3BQ9BZI7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 RNU5A-8P-201ENST00000364102 114 ntBASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 MIR513A1-201ENST00000385138 129 ntBASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 RNU1-139P-201ENST00000391307 165 ntBASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 MTND4P25-201ENST00000441039 533 ntBASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 RPS23P4-201ENST00000487908 423 ntBASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 MTCYBP40-201ENST00000509390 1135 ntBASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 AP003034.1-201ENST00000534621 422 ntBASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 SUB1P4-201ENST00000566062 339 ntBASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 AC124016.2-201ENST00000610058 665 ntBASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 AL365204.3-201ENST00000612448 685 ntBASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 AL512506.1-201ENST00000613918 449 ntBASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 AC008133.2-201ENST00000624540 351 ntBASIC1.28□□□□□ -2.2
UPF3BQ9BZI7 Y_RNA.30-201ENST00000362572 97 ntBASIC1.27□□□□□ -2.21
UPF3BQ9BZI7 SNORD14B-201ENST00000364533 90 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms