Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 RNU6-740P-201ENST00000364734 105 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 Y_RNA.319-201ENST00000365138 92 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 SNORD116-20-201ENST00000384529 92 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 RNA5SP213-201ENST00000391031 106 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 HSPE1P26-201ENST00000405341 275 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 MTHFD2P2-201ENST00000407725 247 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 RNU2-61P-201ENST00000411069 191 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 RPL19P1-201ENST00000411635 428 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 AC004975.1-201ENST00000428733 208 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 RPL26P9-201ENST00000457466 433 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 AC117440.1-201ENST00000474107 571 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 RPS26P15-201ENST00000488067 348 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 RNU6-1278P-201ENST00000516130 107 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 RNU6-1198P-201ENST00000516904 67 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 MIR4423-201ENST00000580922 80 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 AC019159.1-201ENST00000605094 187 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 AL138963.2-201ENST00000605137 226 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 AC005296.1-201ENST00000616145 209 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 AC008785.1-201ENST00000624475 456 ntBASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
TRIM56Q9BRZ2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 RNA5SP361-201ENST00000362686 118 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 RNU1-14P-201ENST00000362759 152 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 Y_RNA.122-201ENST00000363331 96 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 RNA5SP513-201ENST00000364648 118 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 Y_RNA.275-201ENST00000364726 110 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 SNORA29-201ENST00000384183 140 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 MIR1193-201ENST00000408109 78 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 RNU4-30P-201ENST00000410245 143 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 AC074117.2-201ENST00000417130 397 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 AL031659.1-201ENST00000447075 539 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 RN7SL585P-201ENST00000470538 280 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 AC006517.1-201ENST00000480485 328 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 RPS27AP10-201ENST00000496103 208 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 RPL7P47-201ENST00000497299 556 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 RNA5SP49-201ENST00000516450 115 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 AC004825.2-201ENST00000616634 455 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 AC068724.3-201ENST00000625906 87 ntBASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM56Q9BRZ2 AC110491.1-201ENST00000562191 2010 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AC018555.1-201ENST00000567548 1980 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 RNU1-132P-201ENST00000364300 164 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 Y_RNA.286-201ENST00000364813 102 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 SNORA46.1-201ENST00000391069 153 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 RN7SKP27-201ENST00000410684 333 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 RNA5SP306-201ENST00000411087 107 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AC011998.1-201ENST00000433403 117 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 HMGN2P10-201ENST00000448085 265 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AC007395.1-201ENST00000451333 677 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 SSXP4-201ENST00000451349 245 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 RPL23AP81-201ENST00000455252 467 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 HMGN2P16-201ENST00000456802 261 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AC010618.1-201ENST00000469924 477 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AC109327.1-201ENST00000471666 403 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 BTF3L4P4-201ENST00000506381 449 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AC026402.1-201ENST00000513642 170 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 Y_RNA.662-201ENST00000516028 97 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AC027288.2-201ENST00000553028 243 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 MIR3160-1-201ENST00000577972 85 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AL451007.1-201ENST00000595491 289 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 MZT1P2-201ENST00000604387 248 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AC048347.1-201ENST00000624621 427 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 MIR3529-201ENST00000637713 78 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms