Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC092656.1-203ENST00000624134 423 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 AL512643.1-201ENST00000635735 524 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
VPS25Q9BRG1 MTND4P21-201ENST00000453886 1357 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 RNU6-942P-201ENST00000363002 107 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 SNORA75B-201ENST00000384053 137 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 MIR200A-201ENST00000384875 90 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 SNORA17.3-201ENST00000391159 129 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 FCF1P10-201ENST00000407590 479 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.38□□□□□ -2.35
VPS25Q9BRG1 RPS3AP1-201ENST00000413190 320 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.38□□□□□ -2.35
VPS25Q9BRG1 AL591043.1-201ENST00000432461 424 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 SNRPEP7-201ENST00000438350 220 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 MTND4P25-201ENST00000441039 533 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.38□□□□□ -2.35
VPS25Q9BRG1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS25Q9BRG1 snoU109.2-201ENST00000459316 135 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS25Q9BRG1 RN7SKP49-201ENST00000516675 260 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 RNA5SP490-201ENST00000517141 136 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.38□□□□□ -2.35
VPS25Q9BRG1 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS25Q9BRG1 HIGD1AP17-201ENST00000554576 276 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.38□□□□□ -2.35
VPS25Q9BRG1 ZNF92P2-201ENST00000600543 1059 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 VN1R107P-201ENST00000601784 209 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 AC080078.3-201ENST00000605407 463 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS25Q9BRG1 AC104465.1-201ENST00000611365 139 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 MIR6835-201ENST00000621552 64 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 AL356094.1-201ENST00000624663 1212 ntBASIC0.38□□□□□ -2.35
VPS25Q9BRG1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.37□□□□□ -2.35
VPS25Q9BRG1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
VPS25Q9BRG1 AL391987.6-201ENST00000305671 199 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
VPS25Q9BRG1 RNU4-12P-201ENST00000365233 139 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 RNU6-744P-201ENST00000365557 107 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 RNU6-650P-201ENST00000365658 111 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 RNU6-701P-201ENST00000384059 107 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 RNU6-1316P-201ENST00000384242 108 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 RNU2-23P-201ENST00000410545 195 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 AC068533.2-201ENST00000411872 306 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 DEFB130D-201ENST00000426866 237 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS25Q9BRG1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.37□□□□□ -2.35
VPS25Q9BRG1 MTND2P20-201ENST00000440805 661 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.37□□□□□ -2.35
VPS25Q9BRG1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS25Q9BRG1 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS25Q9BRG1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
VPS25Q9BRG1 RNY4P37-201ENST00000516225 96 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 RNA5SP481-201ENST00000516814 122 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS25Q9BRG1 AC087897.1-201ENST00000550134 156 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 AC126365.2-201ENST00000580630 379 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS25Q9BRG1 AC022022.2-201ENST00000602989 360 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 MIR3976-201ENST00000606807 139 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 AL157770.1-201ENST00000623049 439 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.37□□□□□ -2.35
VPS25Q9BRG1 MIR3529-201ENST00000637713 78 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 AC010615.1-201ENST00000594254 1764 ntBASIC0.37□□□□□ -2.35
VPS25Q9BRG1 Y_RNA.332-201ENST00000365271 113 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 SNORA4.3-201ENST00000365564 137 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 RNU6-910P-201ENST00000390844 107 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 SNORA12-201ENST00000391162 147 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 AC005094.1-201ENST00000440420 368 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.36□□□□□ -2.35
VPS25Q9BRG1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.36□□□□□ -2.35
VPS25Q9BRG1 AC079776.3-201ENST00000450665 370 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 AC012308.1-201ENST00000451232 178 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.36□□□□□ -2.35
VPS25Q9BRG1 RNU6-333P-201ENST00000459117 107 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.36□□□□□ -2.35
VPS25Q9BRG1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.36□□□□□ -2.35
VPS25Q9BRG1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.36□□□□□ -2.35
VPS25Q9BRG1 RN7SKP219-201ENST00000516825 296 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 RNU6-64P-201ENST00000517119 105 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 AC091163.3-201ENST00000518269 1144 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.36□□□□□ -2.35
VPS25Q9BRG1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.36□□□□□ -2.35
VPS25Q9BRG1 AC104417.1-201ENST00000523974 751 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.36□□□□□ -2.35
VPS25Q9BRG1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.36□□□□□ -2.35
VPS25Q9BRG1 MIR4293-201ENST00000584305 78 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 BNIP3P9-201ENST00000603714 553 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 KATNBL1P5-201ENST00000605015 517 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 AC108706.1-201ENST00000611053 297 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.36□□□□□ -2.35
VPS25Q9BRG1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.36□□□□□ -2.35
VPS25Q9BRG1 CDR1-202ENST00000625883 1485 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 RNU6-289P-201ENST00000364093 107 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 SNORA4.2-201ENST00000365313 147 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 RNA5SP259-201ENST00000365541 109 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 MIR508-201ENST00000384857 115 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 MIR10B-201ENST00000385011 110 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 SNORD12-201ENST00000391002 90 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms